Alternatives and similar repositories for pyCirclize

Users that are interested in pyCirclize are comparing it to the libraries listed below

• ponnhide / pyCircos
  python Circos
  ☆364Updated last year
• ponnhide / patchworklib
  Patchwork for matplotlib: A subplot manager for intuitive layouts in matplotlib, seaborn, and plotnine.
  ☆422Updated 7 months ago
• trevismd / statannotations
  add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different…
  ☆789Updated 3 months ago
• reneshbedre / bioinfokit
  Bioinformatics data analysis and visualization toolkit
  ☆356Updated last year
• Marsilea-viz / marsilea
  Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)
  ☆283Updated last month
• DingWB / PyComplexHeatmap
  PyComplexHeatmap: A Python package to plot complex heatmap (clustermap)
  ☆348Updated this week
• jnothman / UpSetPlot
  Draw UpSet plots with Matplotlib
  ☆364Updated last year
• owkin / PyDESeq2
  A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
  ☆679Updated last week
• pachterlab / gget
  🧬 gget enables efficient querying of genomic reference databases
  ☆1,056Updated this week
• webermarcolivier / statannot
  add statistical annotations (pvalue significance) on an existing boxplot generated by seaborn boxplot
  ☆402Updated 3 years ago
• zqfang / GSEApy
  Gene Set Enrichment Analysis in Python
  ☆656Updated last week
• Edinburgh-Genome-Foundry / DnaFeaturesViewer
  Python library to plot DNA sequence features (e.g. from Genbank files)
  ☆657Updated 2 months ago
• tanghaibao / goatools
  Python library to handle Gene Ontology (GO) terms
  ☆858Updated last week
• sgkit-dev / sgkit
  Scalable genetics toolkit
  ☆262Updated 2 months ago
• scikit-bio / scikit-bio
  scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resourc…
  ☆974Updated 2 weeks ago
• moshi4 / pyGenomeViz
  A genome visualization python package for comparative genomics
  ☆360Updated 3 weeks ago
• cmdcolin / awesome-genome-visualization
  A list of interesting genome browser and genome visualization programs
  ☆1,008Updated 2 weeks ago
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆283Updated 3 months ago
• pachterlab / BI-BE-CS-183-2023
  Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
  ☆500Updated last year
• snakemake / snakemake
  This is the development home of the workflow management system Snakemake. For general information, see
  ☆2,578Updated this week
• pyranges / pyranges
  Performant Pythonic GenomicRanges
  ☆485Updated 6 months ago
• sourmash-bio / sourmash
  Quickly search, compare, and analyze genomic and metagenomic data sets.
  ☆523Updated this week
• mortazavilab / PyWGCNA
  PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
  ☆264Updated 7 months ago
• qiime2 / qiime2
  Source for the QIIME 2 Framework (Q2F).
  ☆513Updated last week
• pog87 / PtitPrince
  python version of raincloud
  ☆297Updated last year
• duerrsimon / bioicons
  A library of free open source icons for science illustrations in biology and chemistry
  ☆1,529Updated last week
• gamcil / clinker
  Gene cluster comparison figure generator
  ☆610Updated 10 months ago
• scverse / anndata
  Annotated data.
  ☆656Updated last week
• opencobra / cobrapy
  COBRApy is a package for constraint-based modeling of metabolic networks.
  ☆517Updated 3 weeks ago
• cokelaer / bioservices
  Access to Biological Web Services from Python.
  ☆312Updated 2 months ago