moshi4 / pyCirclize

Related projects ⓘ

Alternatives and complementary repositories for pyCirclize

• ponnhide / pyCircos
  python Circos
  ☆340Updated 5 months ago
• ponnhide / patchworklib
  Patchwork for matplotlib: A subplot manager for intuitive layouts in matplotlib, seaborn, and plotnine.
  ☆382Updated last month
• reneshbedre / bioinfokit
  Bioinformatics data analysis and visualization toolkit
  ☆340Updated 5 months ago
• trevismd / statannotations
  add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different…
  ☆673Updated this week
• pachterlab / gget
  🧬 gget enables efficient querying of genomic reference databases
  ☆949Updated this week
• webermarcolivier / statannot
  add statistical annotations (pvalue significance) on an existing boxplot generated by seaborn boxplot
  ☆395Updated 2 years ago
• DingWB / PyComplexHeatmap
  PyComplexHeatmap: A Python package to plot complex heatmap (clustermap)
  ☆293Updated this week
• zqfang / GSEApy
  Gene Set Enrichment Analysis in Python
  ☆569Updated last week
• Marsilea-viz / marsilea
  Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)
  ☆174Updated 2 months ago
• jnothman / UpSetPlot
  Draw UpSet plots with Matplotlib
  ☆329Updated 6 months ago
• scikit-bio / scikit-bio
  scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resourc…
  ☆896Updated this week
• Edinburgh-Genome-Foundry / DnaFeaturesViewer
  Python library to plot DNA sequence features (e.g. from Genbank files)
  ☆601Updated 3 months ago
• sgkit-dev / sgkit
  Scalable genetics toolkit
  ☆235Updated 2 weeks ago
• mikelove / awesome-multi-omics
  List of software packages for multi-omics analysis
  ☆734Updated 7 months ago
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆242Updated this week
• cmdcolin / awesome-genome-visualization
  A list of interesting genome browser or genome-browser-like implementations
  ☆863Updated this week
• pachterlab / BI-BE-CS-183-2023
  Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
  ☆451Updated 10 months ago
• owkin / PyDESeq2
  A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
  ☆590Updated this week
• ACCLAB / DABEST-python
  Data Analysis with Bootstrapped ESTimation
  ☆345Updated this week
• gamcil / clinker
  Gene cluster comparison figure generator
  ☆532Updated 2 months ago
• fayjustin / computational_biology
  course material
  ☆122Updated last year
• moshi4 / pyGenomeViz
  A genome visualization python package for comparative genomics
  ☆285Updated 3 weeks ago
• gosling-lang / gos
  A declarative interactive genomics visualization library for Python.
  ☆218Updated this week
• GangCaoLab / CoolBox
  Jupyter notebook based genomic data visualization toolkit.
  ☆227Updated 4 months ago
• jackievaleri / BioAutoMATED
  Automated machine learning for analyzing, interpreting, and designing biological sequences
  ☆166Updated last year
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆129Updated last month
• tfardet / mpl_chord_diagram
  Plot chord diagrams with matplotlib
  ☆54Updated 11 months ago
• flekschas / jupyter-scatter
  Interactive 2D scatter plot widget for Jupyter Lab and Notebook. Scales to millions of points!
  ☆392Updated 3 weeks ago
• pyranges / pyranges
  Performant Pythonic GenomicRanges
  ☆443Updated 5 months ago
• KrishnaswamyLab / PHATE
  PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.
  ☆475Updated last month