fayjustin / computational_biologyView external linksLinks
course material
☆135Jan 18, 2023Updated 3 years ago
Alternatives and similar repositories for computational_biology
Users that are interested in computational_biology are comparing it to the libraries listed below
Sorting:
- Bioinformatics algorithms: Needleman-Wunsch, Feng-Doolittle, Gotoh and Nussinov implemented in Python☆18Dec 14, 2016Updated 9 years ago
- Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023☆516Jan 14, 2026Updated last month
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆18Apr 2, 2020Updated 5 years ago
- A pipeline creation tool using Snakemake☆12Updated this week
- Essential introductory materials to get into computational biology.☆41Jun 24, 2024Updated last year
- Course in population genomics at BiRC☆12Updated this week
- Population genetics notes☆691Jun 1, 2023Updated 2 years ago
- A continually expanding collection of RNA-seq tools☆53Feb 8, 2026Updated last week
- Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis☆12Mar 10, 2021Updated 4 years ago
- Coronavirus (SARS-Cov-2) sequencing analysis☆10Oct 5, 2021Updated 4 years ago
- Listing of GPU based bioinformatics software & sites & publications☆12Jan 16, 2022Updated 4 years ago
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆22Aug 7, 2023Updated 2 years ago
- Immuological gene typing and annotation for genome assembly☆38Mar 13, 2025Updated 11 months ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- ☆13Aug 18, 2023Updated 2 years ago
- Transfer HiFi read mappings from their own assembly contigs to a standard reference☆29Dec 30, 2025Updated last month
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆17Mar 10, 2022Updated 3 years ago
- Workshop on Genomics - Genomics Adventure☆47Jan 22, 2026Updated 3 weeks ago
- Tutorial for "Advances in machine learning for molecules" (for Summer School for Machine Learning in Bioinformatics, https://cs.hse.ru/ss…☆21Aug 26, 2020Updated 5 years ago
- Sketch phylogenetic trees and networks☆24Feb 5, 2026Updated last week
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆28Apr 24, 2025Updated 9 months ago
- Targeted and non-targeted anticancer drugs and drug regimens☆30Jan 21, 2026Updated 3 weeks ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Aug 25, 2022Updated 3 years ago
- A framework for simulation-based inference in evolutionary biology☆28Jan 13, 2026Updated last month
- drunk on perbase pileups and lua expressions☆19Nov 15, 2025Updated 3 months ago
- Introduction to Ancient Metagenomics Book☆15Nov 27, 2025Updated 2 months ago
- Introduction to Computational Biology - source Rmarkdown files☆66Oct 28, 2024Updated last year
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 6 months ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Nov 21, 2019Updated 6 years ago
- Unix, R and python tools for genomics and data science☆1,367Aug 25, 2025Updated 5 months ago
- My computational biology course as it evolves in real time☆14Aug 31, 2021Updated 4 years ago
- Analysis pipelines for cancer genome sequencing in mice.☆21Jul 29, 2024Updated last year
- Simple pileup-based variant caller☆94Apr 25, 2025Updated 9 months ago
- Introduction to Computational Biology☆33Nov 15, 2024Updated last year
- BED QC tool (in the making)☆17Aug 19, 2022Updated 3 years ago
- ☆21Dec 26, 2025Updated last month
- AWS for Bioinformatics Researchers☆184Jul 17, 2025Updated 6 months ago
- Vector graphics cartoons from protein structure☆57Jun 22, 2022Updated 3 years ago
- Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control.☆133Updated this week