☆11Oct 6, 2025Updated 10 months ago
Alternatives and similar repositories for deep-learning-for-scRNAseq
Users that are interested in deep-learning-for-scRNAseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Jan 8, 2020Updated 6 years ago
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- An automated workflow for processing ddRADseq data using Stacks v2.4. Starts with sequencer files, and ends with various input files for …☆10Apr 25, 2024Updated 2 years ago
- The dysbiosisR package implements tools for calculating some common microbiome dysbiosis measures☆16Dec 2, 2022Updated 3 years ago
- R package version of the splinectomy longitudinal statistical analysis tools☆17Apr 21, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The practical material from the course Biotech 7005: Bioinformatics and Systems Modelling☆23Oct 28, 2019Updated 6 years ago
- Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of m…☆28Feb 5, 2024Updated 2 years ago
- various sources and scripts for genomic research software☆10May 11, 2015Updated 11 years ago
- Repository for codes, analyses and visualizations for the CAMI II challenges☆15Sep 4, 2023Updated 2 years ago
- FLASH (Fast Length Adjustment of SHort reads); mirror of https://git.code.sf.net/p/flashpage/code☆14Mar 6, 2018Updated 8 years ago
- Repository of codes and notebooks used during the 2024 UQ-Bio Summer School.☆15May 16, 2025Updated last year
- Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes.☆14Feb 24, 2025Updated last year
- A tool for visualising kmers in 2D space.☆14Feb 23, 2025Updated last year
- ☆25Oct 16, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Computational Pangenomics☆17Jun 1, 2022Updated 4 years ago
- The BV-BRC Command Line Interface☆19Aug 6, 2025Updated last year
- ☆19Updated this week
- The PanGenome Graph Builder☆17Jul 17, 2024Updated 2 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆22Feb 21, 2025Updated last year
- An RNA pipeline built on top of ADAM. Apache 2 licensed.☆19Jan 19, 2018Updated 8 years ago
- An introductory workshop to protein language models☆17May 24, 2022Updated 4 years ago
- Nextflow pipelines to process long read ONT and/or pacbio HiFi data☆18Jul 30, 2026Updated 2 weeks ago
- Recovery of eukaryotic genomes using contrastive learning. A specialized metagenomic binning tool designed for recovering high-quality eu…☆22Jul 17, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Taxonomic Classification of Bacteria and Archaea Genomes☆19May 20, 2026Updated 2 months ago
- Source code associated with final project for Machine Learning Course (CS 229) at Stanford University; Used reinforcement learning approa…☆31May 21, 2016Updated 10 years ago
- Ensemble binning strategies for combining the output of multiple binning methods.☆22Mar 11, 2023Updated 3 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Aug 9, 2025Updated last year
- asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models☆22Jul 30, 2026Updated 2 weeks ago
- Tutorials on how to use the microGVL to do common bacterial bioinformatic tasks☆25Jun 11, 2024Updated 2 years ago
- ☆23Jan 6, 2026Updated 7 months ago
- A multimodal model bridging vision and genomics for biodiversity monitoring at scale.☆21Jul 28, 2026Updated 2 weeks ago
- Distance-based Phylogenetic Placer☆23Jul 13, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- HErbarium Specimen sheet PIpeline☆20Jul 27, 2026Updated 2 weeks ago
- a customizable protein feature visualization tool☆20Apr 5, 2023Updated 3 years ago
- A Hierarchical Softmax Framework for PyTorch☆23Jul 10, 2025Updated last year
- Perform GWAS with gemma in a simple pipeline☆27Apr 26, 2025Updated last year
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆29Jan 15, 2026Updated 7 months ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆31Sep 27, 2019Updated 6 years ago
- Jailbreak Evo☆23Jun 2, 2025Updated last year