EvanKomp / aide_predictLinks
A toolset and pipeline for running zero shot and supervised protein fitness prediction, drop in compatible with scikitlearn
☆13Updated 2 months ago
Alternatives and similar repositories for aide_predict
Users that are interested in aide_predict are comparing it to the libraries listed below
Sorting:
- Slides + Iframe = sliFrame☆55Updated 10 months ago
- Quick mapping of Uniprot sequences to PDB structures☆36Updated 10 months ago
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆47Updated 2 months ago
- ☆45Updated 10 months ago
- Fast protein backbone flexibility prediction model☆34Updated last month
- Learning Binding Affinities via Fine-tuning of Protein and Ligand Language Models☆35Updated last year
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆87Updated 4 months ago
- 📽️ Game-changing scripts for molecular visualization — produce Hollywood-quality visuals with scientific accuracy and cinematic impact☆80Updated last week
- Protein Structure Analysis☆63Updated 4 months ago
- Extension of ThermoMPNN for double mutant predictions☆53Updated 3 months ago
- Structure prediction of alternative protein conformations☆80Updated 11 months ago
- Boltzina: Efficient and Accurate Virtual Screening via Docking-Guided Binding Prediction with Boltz-2☆78Updated 2 months ago
- ☆54Updated 2 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆43Updated last year
- A lightweight, fast pocket finder in Python.☆79Updated 2 weeks ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆61Updated 8 months ago
- Efficient manipulation of protein structures in Python☆61Updated 4 months ago
- A benchmark for 3D biomolecular structure prediction models☆69Updated 8 months ago
- ☆30Updated 4 months ago
- Prediction of Antibody CDR and protein loop flexibility☆17Updated 4 months ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated last year
- Code for running BinderFlow☆57Updated 2 months ago
- Ligand-Protein Interaction Mapping☆75Updated 9 months ago
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆73Updated 10 months ago
- Official repository for the ProteinDJ protein design pipeline☆84Updated 2 weeks ago
- Structure prediction and design of proteins with noncanonical amino acids☆117Updated this week
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆46Updated this week
- A Unified Approach to Protein Engineering☆41Updated last year
- ☆65Updated 3 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆41Updated 7 months ago