Alternatives and similar repositories for aide_predict:

Users that are interested in aide_predict are comparing it to the libraries listed below

• rwmontalvao / Melodia_py
  Protein Structure Analysis
  ☆54Updated 3 weeks ago
• novonordisk-research / pepfunn
  Python package for the analysis of natural and modified peptides using a set of modules to study their sequences
  ☆33Updated 2 months ago
• log-md / sliFrame
  Slides + Iframe = sliFrame
  ☆46Updated this week
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated 10 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆31Updated 3 weeks ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆52Updated 5 months ago
• sokrypton / af2bind
  ☆49Updated 3 weeks ago
• DunbrackLab / IPSAE
  Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
  ☆44Updated this week
• iriziotis / Uniprot-PDB-mapper
  Quick mapping of Uniprot sequences to PDB structures
  ☆27Updated last week
• aivant / peppr
  It's a package for evaluation of predicted poses, right?
  ☆34Updated this week
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆26Updated last year
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆41Updated 9 months ago
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆31Updated 2 weeks ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆75Updated last month
• bene837 / af2seq
  ☆43Updated 6 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆44Updated 3 months ago
• ibmm-unibe-ch / TemBERTure
  ☆25Updated 7 months ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆41Updated 2 years ago
• pritampanda15 / PandaDock
  PandaDock: A Physics-Based Molecular Docking using Python
  ☆41Updated this week
• tiwarylab / af2rave
  Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2
  ☆46Updated this week
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆65Updated 7 months ago
• pritampanda15 / PandaMap
  Ligand-Protein Interaction Mapping
  ☆35Updated this week
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆88Updated last month
• duerrsimon / folding_tools
  A collection of *fold* tools
  ☆20Updated 2 years ago
• maranasgroup / CatPred
  Machine Learning models for in vitro enzyme kinetic parameter prediction
  ☆40Updated 3 weeks ago
• meyresearch / BALM
  Learning Binding Affinities via Fine-tuning of Protein and Ligand Language Models
  ☆24Updated 4 months ago
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆56Updated 3 months ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆30Updated 6 years ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆53Updated 3 weeks ago
• matteoferla / rdkit_to_params
  Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file
  ☆32Updated last year