EvanKomp / aide_predictLinks
A toolset and pipeline for running zero shot and supervised protein fitness prediction, drop in compatible with scikitlearn
☆11Updated 3 weeks ago
Alternatives and similar repositories for aide_predict
Users that are interested in aide_predict are comparing it to the libraries listed below
Sorting:
- Slides + Iframe = sliFrame☆54Updated 3 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆110Updated 3 weeks ago
- Plugin for folding sequences directly in PyMOL☆101Updated 2 weeks ago
- ☆171Updated last week
- Quick mapping of Uniprot sequences to PDB structures☆32Updated 3 months ago
- Extension of ThermoMPNN for double mutant predictions☆37Updated 2 weeks ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆29Updated 3 months ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆64Updated 3 months ago
- ☆50Updated 3 weeks ago
- ☆43Updated 10 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆63Updated 3 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆67Updated 10 months ago
- ☆42Updated 2 weeks ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆131Updated 2 weeks ago
- Composing Unbalanced Flows for Flexible Docking and Relaxation (ICLR 2025)☆43Updated last month
- Protein Structure Analysis☆55Updated 3 weeks ago
- ☆27Updated last year
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆34Updated 5 months ago
- PandaDock: A Physics-Based Molecular Docking using Python☆70Updated this week
- Structure prediction of alternative protein conformations☆76Updated 4 months ago
- ☆55Updated last month
- ☆23Updated last year
- 🧿 Game-changing scripts for molecular visualization — produce Hollywood-quality visuals with scientific accuracy and cinematic impact 📽…☆37Updated last week
- Analysis of alphafold and colabfold results☆30Updated last week
- Ligand-Protein Interaction Mapping☆56Updated 2 months ago
- Metrics for our protein design competitions.☆33Updated 8 months ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated 11 months ago
- A benchmark for 3D biomolecular structure prediction models☆61Updated 2 months ago
- Official repository of GENzyme☆53Updated 7 months ago