David-Araripe / UniProtMapper
A Python wrapper for the UniProt Mapping RESTful API.
☆9Updated last month
Alternatives and similar repositories for UniProtMapper:
Users that are interested in UniProtMapper are comparing it to the libraries listed below
- ☆28Updated 3 years ago
- Conservation analysis of homologous proteins with Python☆10Updated 3 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆82Updated last year
- ☆20Updated 2 years ago
- Feature map and function annotation of Proteins☆32Updated 9 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆53Updated 4 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 3 months ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆21Updated 3 months ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆42Updated 2 months ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆89Updated this week
- MMseqs2 app to run on your workstation or servers☆75Updated last week
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆102Updated 7 months ago
- ☆66Updated 6 months ago
- A domain parser for Alphafold models☆34Updated last year
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆21Updated 4 years ago
- Evolutionary conservation estimation of residues or nucleotides☆37Updated 3 years ago
- ColabFold protocol☆50Updated 5 months ago
- Generator and regressor neural networks for antimicrobial peptides☆21Updated last year
- A tool for protein and protein complex structure prediction.☆26Updated 2 weeks ago
- ☆49Updated this week
- ☆9Updated last year
- ☆34Updated 6 months ago
- The official pytorch implementation of "LightRoseTTA: High-efficient and Accurate Protein Structure Prediction Using an Ultra-Lightweight…☆9Updated this week
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆89Updated 8 months ago
- ☆22Updated last year
- ☆29Updated last year
- Detection of remote homology by comparison of protein language model representations☆49Updated 3 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆41Updated 8 months ago
- Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energ…☆16Updated 4 years ago