David-Araripe / UniProtMapperLinks
A Python wrapper for the UniProt Mapping RESTful API.
☆13Updated 3 months ago
Alternatives and similar repositories for UniProtMapper
Users that are interested in UniProtMapper are comparing it to the libraries listed below
Sorting:
- Fast protein domain structure embedding+search tool☆27Updated 2 months ago
- Feature map and function annotation of Proteins☆34Updated last year
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆77Updated this week
- Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.☆18Updated last year
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- ☆12Updated 11 months ago
- Transmembrane proteins predicted through Language Model embeddings☆41Updated 4 months ago
- Protein structure alignment and search algorithm☆74Updated this week
- DeepECtransformer☆29Updated 2 years ago
- Detection of remote homology by comparison of protein language model representations☆57Updated 11 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆166Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- Multi-Species Codon Optimization Engine☆27Updated 4 months ago
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆75Updated 3 months ago
- Comprehensive Python client for the Uniprot REST API☆52Updated last month
- Next generation sequence parameter library for proteins☆36Updated 2 months ago
- MMseqs2 app to run on your workstation or servers☆98Updated last month
- ProtSpace is program that helps in visualizing and investigating our protein embedding space.☆44Updated this week
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆46Updated 3 weeks ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆49Updated last week
- Protein Sequence Annotation with Language Models☆25Updated 6 months ago
- Multi-class signal peptide prediction and structure decoding model.☆97Updated 9 months ago
- A PCR primer tool for DNA assembly flows☆34Updated last year
- Conservation analysis of homologous proteins with Python☆12Updated 4 years ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆106Updated 2 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 7 months ago
- ☆44Updated last year
- Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates☆21Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆52Updated 3 years ago
- Virus Protein Structural Analysis Toolkit☆14Updated last year