Alternatives and similar repositories for ANTIPASTI

Users that are interested in ANTIPASTI are comparing it to the libraries listed below

• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆25Updated 10 months ago
• Fleishman-Lab / CUMAb
  ☆19Updated last month
• AbSciBio / igdesign
  ☆40Updated 4 months ago
• oxpig / SPACE2
  Tool for rapid clustering of antibody models by the structure of their CDRs.
  ☆20Updated 7 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆31Updated last month
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆55Updated 2 weeks ago
• KULL-Centre / _2024_cagiada_stability
  ☆67Updated 2 months ago
• regeneron-mpds / propermab
  ☆23Updated 2 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆57Updated 6 months ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆59Updated last year
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆54Updated 7 months ago
• Kuhlman-Lab / evopro
  ☆81Updated 2 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆66Updated 9 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆83Updated 2 weeks ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 10 months ago
• bene837 / af2seq
  ☆43Updated 8 months ago
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆73Updated this week
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆30Updated 7 months ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆55Updated last year
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆43Updated 6 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆59Updated 3 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆48Updated 2 weeks ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆71Updated 4 months ago
• dina-lab3D / CombFold
  ☆83Updated 8 months ago
• CarbonMatrixLab / carbonnovo
  Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model
  ☆22Updated 6 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆42Updated 6 months ago