A simple BLOSUM module for python3
☆18Nov 21, 2025Updated 7 months ago
Alternatives and similar repositories for blosum
Users that are interested in blosum are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Approximate subgraph motif mining through learnable edge contraction.☆15Aug 3, 2023Updated 2 years ago
- ☆14Jun 5, 2024Updated 2 years ago
- ☆12Mar 16, 2024Updated 2 years ago
- Python module for parsing, writing, aligning, and manipulating glycan structrures☆10Jun 23, 2026Updated last week
- R integration for edlib, a C/C++ library for pairwise sequence alignment using edit distance (Levenshtein distance).☆11Jul 20, 2025Updated 11 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Protein generative model conditioned on Gene Ontology terms☆34Jul 17, 2022Updated 3 years ago
- A standalone program that reads files created with the graphical network editor Escher and converts them to files in community standard f…☆16Mar 4, 2026Updated 4 months ago
- Massively-Parallel Natural Extension of Reference Frame☆34Jan 18, 2023Updated 3 years ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Jun 15, 2026Updated 2 weeks ago
- Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022☆13Jan 8, 2024Updated 2 years ago
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆24Jun 29, 2026Updated last week
- Python package for compositional data analysis☆14Dec 1, 2023Updated 2 years ago
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆18Jun 29, 2026Updated last week
- A Missile Command video game Atari clone coding in Python☆12Feb 3, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.☆13Apr 28, 2026Updated 2 months ago
- Genomic sequence preprocessing toolkit☆14Jun 26, 2026Updated last week
- SNP and indel calls from multiple sequence alignment (MSA)☆13Nov 11, 2022Updated 3 years ago
- A package for making MuE observation models in Edward2.☆13Jun 10, 2021Updated 5 years ago
- Phylotype your strains using Clermont's 2013 method: ezclermont.org☆15May 5, 2026Updated 2 months ago
- ☆10Jun 9, 2025Updated last year
- Python Clone of the game "Color Switch"☆10Oct 15, 2018Updated 7 years ago
- ☆14Jan 31, 2020Updated 6 years ago
- ☆14Dec 8, 2022Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- genetic distance plotting for recombination events analysis☆10Feb 25, 2026Updated 4 months ago
- PDB ProtVista Viewer☆11Updated this week
- Assort phage protein sequences into phamilies using MMseqs2☆12Dec 16, 2024Updated last year
- Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.☆17Jan 7, 2020Updated 6 years ago
- convert a blast output to a bed file☆12Jun 19, 2015Updated 11 years ago
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆14Jun 25, 2026Updated last week
- Drug Resistance Prediction with Reference Graphs☆21Oct 23, 2025Updated 8 months ago
- Estimate PTM hotspots in protein sequence alignments☆15Feb 6, 2019Updated 7 years ago
- Shared k-mer content between two genomes☆18Jun 21, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…☆17Feb 1, 2021Updated 5 years ago
- A python implementation of the Burrows Wheeler Alignment for DNA sequence matching☆15Aug 23, 2018Updated 7 years ago
- Just a python fasta/q parser based on kseq.h☆14Jul 13, 2020Updated 5 years ago
- Analysis tools for SLEAP-based plant root phenotyping.☆13Jun 25, 2026Updated last week
- Insights into the inner workings of transformer models for protein function prediction☆14Feb 9, 2024Updated 2 years ago
- CPP_FightingGame☆11May 12, 2023Updated 3 years ago
- A fast approximation to a Dirichlet Process Mixture model (DPM) for clustering genetic data☆71Feb 23, 2026Updated 4 months ago