bids-standard / bids-starter-kitView external linksLinks
The Starter-kit has moved to the new BIDS website.
☆276Feb 21, 2025Updated 11 months ago
Alternatives and similar repositories for bids-starter-kit
Users that are interested in bids-starter-kit are comparing it to the libraries listed below
Sorting:
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆209Feb 5, 2026Updated last week
- Validator for the Brain Imaging Data Structure☆184Dec 11, 2025Updated 2 months ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆190Jan 8, 2026Updated last month
- Python tools for querying and manipulating BIDS datasets.☆254Feb 2, 2026Updated last week
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆715Updated this week
- Brain Imaging Data Structure (BIDS) Specification☆342Updated this week
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆52May 12, 2025Updated 9 months ago
- BIDScoin converts your source-level neuroimaging data to BIDS☆150Dec 8, 2025Updated 2 months ago
- Flexible DICOM conversion into structured directory layouts☆273Jan 22, 2026Updated 3 weeks ago
- A collection of semi-useful Matlab scripts for processing fMRI data using SPM12☆32Jun 1, 2020Updated 5 years ago
- DICOM to NIfTI conversion, NIfTI tools☆102Feb 2, 2026Updated last week
- Generate custom Docker and Singularity images, and minimize existing containers☆356Feb 1, 2026Updated last week
- ☆712Sep 19, 2025Updated 4 months ago
- A Python implementation of 'dual-coding'☆42Apr 24, 2024Updated last year
- Processing pipelines for the HCP☆631Updated this week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated this week
- Real-time tractogram computer and visualizer☆16Dec 21, 2022Updated 3 years ago
- Utility functions for working with DICOM and BIDS neuroimaging data☆64Nov 6, 2025Updated 3 months ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆162Jan 26, 2026Updated 2 weeks ago
- MATLAB / Octave tools for BIDS datasets☆58Updated this week
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆346Jan 28, 2026Updated 2 weeks ago
- MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.☆162Updated this week
- Workflows and interfaces for neuroimaging packages☆807Oct 27, 2025Updated 3 months ago
- fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…☆71Jun 7, 2022Updated 3 years ago
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆242Feb 4, 2026Updated last week
- Python interface for generating coordinate tables and region labels from statistical MRI images☆116Feb 1, 2026Updated last week
- BIDS app wrapping recon-all from FreeSurfer☆44Dec 15, 2025Updated last month
- A curated list of awesome BIDS projects, proposals, apps and resources☆16Feb 2, 2026Updated last week
- parallel FSL processing without requiring SGE☆28Sep 3, 2021Updated 4 years ago
- ☆211Jun 23, 2023Updated 2 years ago
- The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface …☆172Jan 15, 2026Updated 3 weeks ago
- Standalone MATLAB implementation of permutation TFCE correction☆43Dec 21, 2018Updated 7 years ago
- Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, chec…☆65Jan 19, 2026Updated 3 weeks ago
- Cortical neuroimaging visualization in Python☆252Dec 15, 2023Updated 2 years ago
- ☆12Dec 17, 2025Updated last month
- Fit Linear Models to BIDS Datasets☆80Dec 15, 2025Updated last month
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆54Jan 6, 2026Updated last month
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆128Mar 21, 2024Updated last year
- a BIDS app for pseudo-anonymization of neuroimaging data☆53Oct 24, 2025Updated 3 months ago