A BIDS App for minimal preprocessing using the HCP Pipelines
☆37Mar 16, 2026Updated 4 months ago
Alternatives and similar repositories for HCPPipelines
Users that are interested in HCPPipelines are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- bids application for processing functional MRI data, robust to scanner, acquisition and age variability.☆58Jan 17, 2026Updated 6 months ago
- This is the documentation repository for ongoing releases to the NDA collection 3165. Please add GitHub Issues here for requests or feed…☆17Oct 15, 2025Updated 9 months ago
- Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)☆89Jun 24, 2026Updated 3 weeks ago
- Processing pipelines for the HCP☆649Updated this week
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆133Nov 8, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Utilities to use HCP and HCP-like data with nilearn and other Python tools☆52Apr 29, 2023Updated 3 years ago
- Optimized cerebral cortical surface mapping of neurite properties using diffsion magnetic resonace imaging (dMRI)☆16May 16, 2023Updated 3 years ago
- To convert Human Connectome projects(HCP) data to BIDS std☆32Aug 1, 2022Updated 3 years ago
- Flexible DICOM conversion into structured directory layouts☆283Updated this week
- ☆15Mar 6, 2026Updated 4 months ago
- Real-time tractogram computer and visualizer☆16Dec 21, 2022Updated 3 years ago
- REACT: Receptor-Enriched Analysis of functional Connectivity by Targets☆26Aug 23, 2023Updated 2 years ago
- Script to generate correlation matrices from BOLD dense or parcellated time series data.☆13Jul 31, 2023Updated 2 years ago
- Scripts to extract features of cortical folding from MRI☆12Mar 10, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- MATLAB code for reading and writing CIFTI connectivity files☆72Feb 25, 2026Updated 4 months ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆42Aug 11, 2023Updated 2 years ago
- This repository contains all code for the BLMM toolbox.☆22Jan 31, 2024Updated 2 years ago
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆43Jul 21, 2022Updated 4 years ago
- A template for decentralized, reproducible processing☆17Aug 19, 2024Updated last year
- ☆22Updated this week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆77Feb 14, 2026Updated 5 months ago
- Code for implementing the Targeted Functional Network Stimulation (TANS) approach described in "Automated optimization of TMS coil placem…☆14Apr 6, 2026Updated 3 months ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆115Updated this week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆741Jul 6, 2026Updated 2 weeks ago
- Code for computing cross-correlation (lags) and autocorrelation (intrinsic timescales) from multivariate time series. Optimized for fMRI …☆25Nov 7, 2024Updated last year
- Python package for interacting with NDA web services. Used to validate, submit, and download data to and from NDA.☆67Jul 7, 2026Updated 2 weeks ago
- Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space☆38Nov 18, 2022Updated 3 years ago
- A suite of brain PET processing pipelines☆14Jan 6, 2025Updated last year
- Schedule and resources from the OHBM Open Science Room: Singapore 2018☆19Jul 6, 2018Updated 8 years ago
- parallel FSL processing without requiring SGE☆28Sep 3, 2021Updated 4 years ago
- BIDS app wrapping recon-all from FreeSurfer☆46Jul 1, 2026Updated 3 weeks ago
- Generate custom Docker and Singularity images, and minimize existing containers☆359Jul 1, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆55May 12, 2025Updated last year
- Basic Neuroimaging functions - stuff missing from nibabel and nilearn☆14Jul 1, 2026Updated 3 weeks ago
- Modern Neuroimaging Made Simple☆27Jul 10, 2026Updated last week
- Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.☆39Sep 24, 2025Updated 9 months ago
- A neuroscience library for Python, intended to complement the existing nibabel library.☆134Oct 14, 2025Updated 9 months ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆369Updated this week
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆251Jun 9, 2026Updated last month