Alternatives and similar repositories for CBIG

Users that are interested in CBIG are comparing it to the libraries listed below

• Washington-University / HCPpipelines
  Processing pipelines for the HCP
  ☆576Updated last week
• nipreps / fmriprep
  fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…
  ☆673Updated 2 weeks ago
• MICA-MNI / BrainSpace
  BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…
  ☆219Updated 4 months ago
• netneurolab / neuromaps
  A toolbox for comparing brain maps
  ☆285Updated last month
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆323Updated last week
• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆175Updated last month
• andrewjahn / AndysBrainBook
  This repository contains the files that generate Andy's Brain Book on ReadTheDocs.
  ☆192Updated last week
• neurodata / neuroparc
  ☆184Updated last year
• yetianmed / subcortex
  ☆120Updated last month
• aestrivex / bctpy
  brain connectivity toolbox for python
  ☆313Updated last year
• Jfortin1 / ComBatHarmonization
  Harmonization of multi-site imaging data with ComBat
  ☆293Updated last year
• canlab / CanlabCore
  Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analy…
  ☆155Updated last week
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆256Updated 3 weeks ago
• OHBA-analysis / HMM-MAR
  Toolbox for segmentation and characterisation of transient connectivity
  ☆222Updated 3 months ago
• bids-standard / bids-starter-kit
  The Starter-kit has moved to the new BIDS website.
  ☆266Updated 3 months ago
• Donders-Institute / bidscoin
  BIDScoin converts your source-level neuroimaging data to BIDS
  ☆138Updated last week
• NeuroanatomyAndConnectivity / gradient_analysis
  ☆92Updated 7 years ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆154Updated last month
• bids-standard / pybids
  Python tools for querying and manipulating BIDS datasets.
  ☆241Updated this week
• Washington-University / workbench
  Connectome Workbench
  ☆200Updated last week
• brainiak / brainiak
  Brain Imaging Analysis Kit
  ☆352Updated 5 months ago
• MICA-MNI / micaopen
  Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute
  ☆77Updated 3 weeks ago
• Washington-University / cifti-matlab
  MATLAB code for reading and writing CIFTI connectivity files
  ☆65Updated 7 months ago
• edickie / ciftify
  The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
  ☆121Updated 2 years ago
• canlab / Neuroimaging_Pattern_Masks
  Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.
  ☆117Updated last week
• DiedrichsenLab / fs_LR_32
  Standard human cortical surface-based template for neuroimaging analyses (Freesurfer, left-right-symmetric, ~32k vertices) v
  ☆43Updated last year
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆240Updated last year
• neurosynth / neurosynth
  Neurosynth core tools
  ☆347Updated last year
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆92Updated this week
• cvnlab / GLMsingle
  A toolbox for accurate single-trial estimates in fMRI time-series data
  ☆120Updated this week