ngs-docs / ngs-scripts
scripts!
☆11Updated 11 years ago
Alternatives and similar repositories for ngs-scripts:
Users that are interested in ngs-scripts are comparing it to the libraries listed below
- Library of snakemake rules.☆12Updated 6 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- What's The Function of these genes?☆22Updated 7 years ago
- App for hosting gene expression/ontology data with Shiny☆17Updated 7 years ago
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆30Updated 8 years ago
- variant discovery and annotation using GATK and Ensembl☆17Updated 11 years ago
- Bioinformatics curated workflows that use Biocontainers tools☆18Updated 5 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- A flexible python program for generating figures from regions of the genome.☆13Updated 5 years ago
- Biological Graphic tool in Python☆34Updated 4 years ago
- [DEPRECATED] An R package for Google Genomics API queries.☆45Updated last year
- Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013☆37Updated 11 years ago
- BigWig manpulation tools using libBigWig and htslib☆28Updated 5 months ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- A Python library to work with high-throughput sequencing data in the context of data integration☆14Updated 7 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Fast, whole-genome simulation of the discrete time Wright-Fisher process☆16Updated 4 years ago
- The software involved in the MetaPhase project, as described in G3 (http://dx.doi.org/10.1534/g3.114.011825)☆16Updated 6 years ago
- Survey of bioinformatics field☆26Updated 12 years ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Updated 6 years ago
- Portable database of microhaplotype marker and allele frequency data☆9Updated last month
- reference free variant assembly☆32Updated last year
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Exploratory data analysis for pooled CRISPR/Cas9 screens☆21Updated 7 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- JAMM Peak Finder for Sequencing Datasets☆28Updated 4 years ago