Pipeline for HiCAR data, a robust and sensitive multi-omic co-assay for simultaneous measurement of transcriptome, chromatin accessibility and cis-regulatory chromatin contacts.
☆12Jun 3, 2025Updated 10 months ago
Alternatives and similar repositories for hicar
Users that are interested in hicar are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Curating Research Assets in Behavioral Sciences: A tutorial on organizing and curating research materials using RStudio & the Git version…☆15Nov 27, 2018Updated 7 years ago
- Implement CarLife protocol in MD devices☆18Nov 11, 2021Updated 4 years ago
- Transforming TCP sockets to MQTT with Go☆12Sep 27, 2020Updated 5 years ago
- A GitHub action to automate acknowledging translators and proofreaders to your projects ✨☆15Apr 1, 2026Updated 2 weeks ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆15Oct 6, 2025Updated 6 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Collection of Sphinx extensions similar to (but more flexible than) numpydoc☆12Apr 7, 2026Updated last week
- kProcessor: kmers processing framework.☆10Oct 1, 2023Updated 2 years ago
- Modeling Spatio-temporal Dynamics of Chromatin Marks☆12Aug 2, 2021Updated 4 years ago
- HiGlass track for displaying arcs between disconnected regions☆10Dec 13, 2022Updated 3 years ago
- Experimental plugin to integrate GPT like prompt into Nextflow☆17Apr 15, 2024Updated 2 years ago
- SingleCellFusion--a tool to integrate single-cell transcriptome and epigenome data☆12Mar 13, 2022Updated 4 years ago
- R package: determining cutoff values from bimodal data☆11Mar 17, 2024Updated 2 years ago
- ☆16Mar 31, 2026Updated 2 weeks ago
- Analysis pipeline for CUT&TAG data☆23Sep 2, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- HiChiP QC and data analysis☆13Mar 12, 2024Updated 2 years ago
- Cellular Genetics Informatics Notebooks☆24Nov 7, 2025Updated 5 months ago
- openASO is a project designed to identify regulatory regions of an RNA that can be targeted by antisense oligonucleotides.☆12Sep 30, 2021Updated 4 years ago
- nimfa - A Python Library for Nonnegative Matrix Factorization Techniques☆10Aug 30, 2018Updated 7 years ago
- ☆11Oct 21, 2022Updated 3 years ago
- ☆13Jul 21, 2021Updated 4 years ago
- Automated marker-based annotation of cell types☆14Aug 8, 2022Updated 3 years ago
- Ultimate NLP Toolkit for GPUs: RAPIDS-AI, PyTorch, NeMo, Tensorboard, TensorRT, CUDA 10.1☆10Mar 19, 2020Updated 6 years ago
- Toolkit for single-cell analysis of chromatin accessibility☆12Feb 27, 2020Updated 6 years ago
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Minified and compressed AutoEQ packages☆25Updated this week
- 自用规则☆13Updated this week
- ☆14May 26, 2020Updated 5 years ago
- This repository including all of exsiting plugins of AppGallery Connect Service in Flutter.☆15Oct 8, 2024Updated last year
- CAGE-sequencing analysis pipeline with trimming, alignment and counting of CAGE tags.☆11Mar 31, 2026Updated 2 weeks ago
- DIAMOND online documentation☆10Sep 2, 2020Updated 5 years ago
- ☆16Mar 1, 2026Updated last month
- Slides and demos from our SciPyConf 2019 talk☆13Sep 28, 2021Updated 4 years ago
- An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq☆40Mar 20, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- HIVDB Genotypic Resistance Interpretation Program☆21Mar 27, 2026Updated 2 weeks ago
- Methylation analysis pipeline for genome graph☆15May 25, 2025Updated 10 months ago
- Influenza genome analysis Nextflow workflow☆25Mar 24, 2026Updated 3 weeks ago
- Codes to run deltaSVM models to predict allelic TF binding☆10Apr 5, 2021Updated 5 years ago
- MNase-seq analysis pipeline using BWA and DANPOS2.☆13Feb 23, 2026Updated last month
- HiView: the universal viewer for hierarchical data☆16Mar 23, 2023Updated 3 years ago
- ChIP-seq peak caller for reads mapped to a graph-based reference genome☆25Aug 17, 2024Updated last year