Indexes genomes using SNVs, MLST, or kmers for rapid querying, clustering, and visualization.
☆12Feb 2, 2023Updated 3 years ago
Alternatives and similar repositories for genomics-data-index
Users that are interested in genomics-data-index are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Report salient qPCR primer/probe or immune epitope mismatches info against a set of pathogen isolate genomes☆16Mar 11, 2025Updated last year
- Experiments with using BIGSI data structure for metagenomic and QC applications☆19Aug 12, 2024Updated 2 years ago
- A simple pipeline for bacterial assembly and quality control☆16Updated this week
- serious constellations of reoccurring phylogenetically-independent origin☆39Feb 13, 2026Updated 6 months ago
- A Python package to update the MLST database for the mlst tool.☆29Jul 22, 2026Updated 3 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆45Feb 13, 2026Updated 6 months ago
- Reproducible workflow for SARS-CoV-2 recombinant sequence detection.☆18May 15, 2023Updated 3 years ago
- Tool for exploring sequence alignment algorithms☆14Aug 30, 2024Updated last year
- Pytorch Implementation of the Explainable Conditional Adversarial Autoencoder using Saliency Maps and SHAP (J. of Imaging - MDPI)☆12Mar 5, 2025Updated last year
- Cython API for the Mutation Annotated Tree (MAT) Online Phylogenetics Toolkit☆14May 28, 2025Updated last year
- Bluetooth Internet Adapter is an idea for a solution allowing Personal Computers to access Internet content via Bluetooth connection to a…☆15Apr 12, 2010Updated 16 years ago
- IRIDA Next