theislab / scanpydocLinks
Collection of Sphinx extensions similar to (but more flexible than) numpydoc
☆11Updated 2 weeks ago
Alternatives and similar repositories for scanpydoc
Users that are interested in scanpydoc are comparing it to the libraries listed below
Sorting:
- Visualising data frames as funky heatmaps 📊, the Python implementation☆23Updated last year
- Simple installer for conda (and conda-likes)☆17Updated last week
- Light-weight Jupyter notebook tracker.☆35Updated 9 months ago
- Benchmarking and metadata tracking for Python. Extensible, with distributed/cluster support.☆20Updated 2 months ago
- ☆26Updated last year
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆16Updated last week
- GitHub Action to set up micromamba☆120Updated last week
- ☆84Updated last year
- Generate a CFF file using the metadata from a software release on Zenodo.☆22Updated 3 years ago
- Configure workflow/pipeline tests using yaml files.☆70Updated last year
- A Jupyter wrapper for the igv.js library (representation of genomic data)☆26Updated 4 years ago
- A cookiecutter template for conda packages using Python☆108Updated this week
- A small python library to adjust and annotate axis ticklabels in plots.☆52Updated 6 months ago
- Generate conda environment.yml from PEP 621 and/or flit config.☆11Updated 4 years ago
- A Python Module for intelligent reuse of docstrings☆32Updated 4 years ago
- Python utilities for CWL☆42Updated 3 weeks ago
- Create minimal docker images from conda environments☆61Updated 2 years ago
- ☆12Updated last year
- ☆14Updated 4 years ago
- The R package manager that is blazingly fast ⚡. Powered by mamba.☆78Updated 3 years ago
- Run python code in sphinx and display the output☆14Updated 10 months ago
- pytest plugin that checks URLs☆18Updated last year
- Manage Zenodo projects with Python☆18Updated 11 months ago
- GitHub action to setup singularity☆18Updated 2 years ago
- Unified API for working with multiple dataclass-like libraries☆20Updated last week
- An opinionated Python package template for pure Python packaging. A package in under 5 minutes with: copier copy gh:pyopensci/pyos-packag…☆28Updated 3 weeks ago
- An opinionated open source deployment of jupyterhub based on an Slurm job scheduler.☆30Updated last year
- Lab notebook for people who like the command line.☆11Updated last year
- Build contrasts for models defined with formulaic☆12Updated last week
- A Python package for generating and working with codemeta☆29Updated 9 months ago