theislab / scanpydocLinks
Collection of Sphinx extensions similar to (but more flexible than) numpydoc
☆12Updated last week
Alternatives and similar repositories for scanpydoc
Users that are interested in scanpydoc are comparing it to the libraries listed below
Sorting:
- The uncompromising Jupyter notebook formatter.☆14Updated last year
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆10Updated last week
- ☆11Updated this week
- ☆13Updated 3 years ago
- Simple installer for conda (and conda-likes)☆16Updated last month
- Prism themes for plotnine, inspired by ggprism.☆14Updated 2 months ago
- An opinionated open source deployment of jupyterhub based on an Slurm job scheduler.☆28Updated 8 months ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- A hatch virtual environment plugin to lock dependencies with pip-deepfreeze☆18Updated 2 years ago
- Light-weight Jupyter notebook tracker.☆34Updated last month
- ☆11Updated 6 months ago
- Hatch plugin for Docker containers☆24Updated 2 years ago
- Expose the inner scope of functions☆23Updated last month
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated 2 years ago
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆15Updated 2 years ago
- ☆10Updated 7 months ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Updated 4 months ago
- Lab notebook for people who like the command line.☆11Updated 11 months ago
- Discoverability for gene search☆12Updated 2 years ago
- Generate identicons for DNA sequences with Python☆37Updated 3 weeks ago
- A Python package for generating and working with codemeta☆28Updated last month
- ☆24Updated 10 months ago
- The toolkit for building extension modules☆25Updated 2 years ago
- CPU and GPU deterministic and therefore fully reproducible machine learning pipelines using MLflow.☆46Updated 2 years ago
- Caching extension for Scanpy☆8Updated 4 years ago
- pytest plugin that checks URLs☆18Updated last year
- Script for converting setup.py to setup.cfg☆78Updated 8 months ago
- A conda-smithy repository for python.☆48Updated last month
- Visualising data frames as funky heatmaps 📊, the Python implementation☆15Updated 3 months ago
- Render CLI arguments (sub-commands friendly) defined by the argparse module.☆24Updated last week