nch-igm / snvstoryLinks
Rapid and accurate ancestry inference using SNVs.
☆19Updated 3 weeks ago
Alternatives and similar repositories for snvstory
Users that are interested in snvstory are comparing it to the libraries listed below
Sorting:
- ☆25Updated last year
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆23Updated last year
- ☆18Updated 5 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 7 months ago
- CADD-SV – a framework to score the effect of structural variants☆14Updated 2 months ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆24Updated 2 years ago
- Location of public benchmarking; primarily final results☆18Updated 3 months ago
- Ultra-fast, high-performing structural variation (SV) detector☆23Updated 2 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 5 years ago
- POSTRE: Prediction Of STRuctural variant Effects☆24Updated 3 months ago
- A JBrowse plugin to view multiple alignment format (MAF) files☆26Updated last year
- Variant catalogue pipeline☆25Updated last month
- A method for measuring chromosome-specific telomere length from long reads☆21Updated last year
- ☆16Updated last year
- v2.x of the microassembly based somatic variant caller☆23Updated last month
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 3 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆12Updated 5 years ago
- Read, parse and operate different multiple input file formats with OpenVariant☆12Updated last week
- Sample Contamination Estimate from VCF☆19Updated 7 months ago
- Immuological gene typing and annotation for genome assembly☆37Updated 2 months ago
- Tools to gather evidence for structural variation via breakpoint detection.☆19Updated last month
- add true-negative SVs from a population callset to a truth-set.☆15Updated 2 years ago
- Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis☆24Updated 2 months ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- 🤖 Open‑source deep-learning-based splice‑site predictor that decodes splicing patterns across species☆19Updated last week
- ☆21Updated last year
- CNV Rapid Aberration Detection And Reporting☆12Updated 4 years ago
- A transposition caller.☆10Updated last year
- Teaching modules for Human Genome Variation Lab.☆20Updated 10 months ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆21Updated 3 years ago