nch-igm / snvstory
Rapid and accurate ancestry inference using SNVs.
☆18Updated 10 months ago
Alternatives and similar repositories for snvstory:
Users that are interested in snvstory are comparing it to the libraries listed below
- FunctionaL Omics Processing platform☆13Updated 6 months ago
- interactive plots for differential expression analysis☆29Updated this week
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆12Updated 5 years ago
- ☆24Updated 10 months ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆23Updated 11 months ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 2 years ago
- ☆18Updated 4 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 4 years ago
- CADD-SV – a framework to score the effect of structural variants☆14Updated 3 weeks ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 3 months ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 5 months ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 2 years ago
- ☆21Updated 8 months ago
- A Quality Control filter and parser for NCBI BLAST XML results.☆16Updated 4 years ago
- Large scale ancestry inference from PCA data☆21Updated last year
- FREE Divergence Error-Correcting DNA Barcodes☆8Updated 6 years ago
- POSTRE: Prediction Of STRuctural variant Effects☆21Updated last week
- Feature-rich Python implementation of the tximport package for gene count estimation.☆33Updated this week
- alternative splicing analysis pipeline☆18Updated 3 years ago
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated last month
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆24Updated last month
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Updated last year
- ☆30Updated 8 months ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆13Updated 5 years ago
- A transposition caller.☆10Updated last year
- Clinical Variant Annotation Pipeline☆10Updated 4 years ago
- Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis☆21Updated this week
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆31Updated last week
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆11Updated 2 years ago
- Variant catalogue pipeline☆25Updated 3 weeks ago