Alternatives and similar repositories for Biomedical-Entity-Linking:

Users that are interested in Biomedical-Entity-Linking are comparing it to the libraries listed below

• dongfang91 / Generate-and-Rank-ConNorm
  Generate-and-Rank Framework with Semantic Type Regularization for Biomedical Concept Normalization
  ☆25Updated 4 years ago
• GanjinZero / KeBioLM
  Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]
  ☆65Updated 2 years ago
• MatNLP / SMedBERT
  SMedBERT: A Knowledge-Enhanced Pre-trained Language Model withStructured Semantics for Medical Text Mining
  ☆77Updated 3 years ago
• PlusLabNLP / GEANet-BioMed-Event-Extraction
  Code for the paper Biomedical Event Extraction with Hierarchical Knowledge Graphs
  ☆61Updated 2 years ago
• laituan245 / bio_relex
  Joint Biomedical Entity and Relation Extraction with Knowledge-Enhanced Collective Inference
  ☆40Updated 2 years ago
• Yuanhy1997 / GenBioEL
  Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning [NAACL 2022]
  ☆18Updated 2 years ago
• heyunh2015 / diseaseBERT
  Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…
  ☆68Updated 3 years ago
• nlpir2020 / MIE-ACL-2020
  code&data for MIE: A Medical Information Extractor towards Medical Dialogues, ACL 2020
  ☆52Updated 4 years ago
• aistairc / DeepEventMine
  DeepEventMine: End-to-end Neural Nested Event Extraction from Biomedical Texts
  ☆95Updated 2 years ago
• alicogintel / Knowledge-Enriched-BERT
  knowledge-enabled bert model papers
  ☆50Updated 4 years ago
• thunlp / RE-Context-or-Names
  Bert-based models(BERT, MTB, CP) for relation extraction.
  ☆100Updated 2 years ago
• Spico197 / NYT-H
  📜 Codes and Data for COLING2020 paper: Towards Accurate and Consistent Evaluation: A Dataset for Distantly-Supervised Relation Extractio…
  ☆31Updated 4 years ago
• dainlp / acl2020-transition-discontinuous-ner
  ☆66Updated 3 years ago
• helloeve / mre-in-one-pass
  Implementation for Extracting Multiple-Relations in One-Passwith Pre-Trained Transformers
  ☆81Updated 5 years ago
• kaisugi / entity-related-papers
  Named Entity Recognition, Entity Linking, and more
  ☆102Updated 2 months ago
• zhoubaohang / E2EMERN
  The source code for ACL 2021 paper
  ☆20Updated 3 years ago
• yuzhimanhua / Multi-BioNER
  Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)
  ☆134Updated 8 months ago
• udel-biotm-lab / BERT-CLRE
  ☆24Updated 3 years ago
• Guardianzc / MedicalChatBox
  The data and codes for the baseline setting of medical chatbox.
  ☆47Updated 3 years ago
• bionlp-hzau / BioNLP-Corpus
  Repository used to collect biomedical corpus on the Internet!
  ☆32Updated 4 years ago
• lavis-nlp / jerex
  PyTorch code for JEREX: Joint Entity-Level Relation Extractor
  ☆63Updated 3 years ago
• foxlf823 / sodner
  ☆53Updated 3 years ago
• thecharm / boundary-aware-nested-ner
  Code for EMNLP 2019 paper "A Boundary-aware Neural Model for Nested Named Entity Recognition"
  ☆89Updated 3 years ago
• allanj / ner_with_dependency
  ☆72Updated 3 years ago
• fenchri / edge-oriented-graph
  Source code for the EMNLP 2019 paper: "Connecting the Dots: Document-level Relation Extraction with Edge-oriented Graphs"
  ☆148Updated 8 months ago
• nanguoshun / LSR
  Pytorch Implementation of our ACL 2020 Paper "Reasoning with Latent Structure Refinement for Document-Level Relation Extraction"
  ☆127Updated 4 years ago
• zonghui0228 / BioMedical-NLP-corpus
  Biomedical NLP Corpus or Datasets.
  ☆61Updated 2 years ago
• vedantc6 / mtl-dts
  Implementation for "Deeper Task-Specificity Improves Joint Entity and Relation Extraction"
  ☆21Updated 2 years ago
• luanyi / DyGIE
  ☆183Updated 5 years ago
• isegura / DDICorpus
  ☆35Updated 4 years ago