insilicomedicine / DILBERTLinks
☆15Updated 2 years ago
Alternatives and similar repositories for DILBERT
Users that are interested in DILBERT are comparing it to the libraries listed below
Sorting:
- ☆18Updated 3 years ago
- This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variab…☆14Updated 3 years ago
- ☆56Updated 4 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆190Updated last year
- ☆22Updated 4 years ago
- Method for drug repurposing from knowledge graphs and literature☆35Updated 4 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- A Standard Database for Drug Repositioning☆19Updated 7 years ago
- Python package for access to online biomedical resources, usually via REST APIs.☆17Updated 2 months ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- The Clinical Trials Knowledge Graph☆57Updated 2 years ago
- Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…☆11Updated last year
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Updated 5 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆178Updated 3 years ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- Source code for "A novel methodology on distributed representations of proteins using their interacting ligands"☆28Updated 5 years ago
- A Knowledge Graph for Relational Learning On Biological Data☆101Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆45Updated 2 months ago
- Findings of EMNLP'22 | Trial2Vec: Zero-Shot Clinical Trial Document Similarity Search using Self-Supervision☆24Updated last year
- ☆50Updated 3 years ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆64Updated 2 months ago
- ☆22Updated 2 years ago
- Knowledge graphs generation from unstructured text.☆71Updated 5 months ago
- COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology☆44Updated 4 years ago
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Updated last year
- Retrieve and process PubTator annotations☆44Updated last year
- Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…☆116Updated 3 years ago
- Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations☆29Updated last year