cambridgeltl / sapbert
[NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.
☆184Updated last year
Alternatives and similar repositories for sapbert:
Users that are interested in sapbert are comparing it to the libraries listed below
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆163Updated last year
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆158Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- ☆97Updated 3 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 2 weeks ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆146Updated last year
- ☆148Updated last year
- ☆90Updated 5 years ago
- BioELECTRA☆51Updated 3 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆52Updated 2 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆292Updated 3 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆322Updated 3 years ago
- ☆224Updated 7 years ago
- SciFive: a text-text transformer model for biomedical literature☆94Updated 9 months ago
- Pre-trained Language Model for Biomedical Question Answering☆122Updated 2 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆28Updated 3 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Code for the emrQA question answering dataset☆146Updated 3 years ago
- ☆25Updated last year
- auto icd coding with prompt☆49Updated 10 months ago
- Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning [NAACL 2022]☆18Updated 2 years ago
- Weakly supervised medical named entity classification☆72Updated 2 years ago
- Conversion from brat-flavored standoff to CoNLL format☆51Updated 4 years ago
- BioCreative-V CDR Corpus☆26Updated 6 years ago
- PubMed PICO Element Detection Dataset☆56Updated 6 years ago
- PyTorch Implementation of BioBERT☆318Updated last year
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago