arwhirang / recursive_chemprot
This is the open source repository of my Recursive Neural Network for the BioCreative 6 track5 - chemprot task.
☆11Updated 6 years ago
Alternatives and similar repositories for recursive_chemprot:
Users that are interested in recursive_chemprot are comparing it to the libraries listed below
- For icibm paper☆11Updated 8 years ago
- ☆48Updated last year
- ☆35Updated 4 years ago
- Code regarding to our paper "N-ary Relation Extraction using Graph State LSTM"☆94Updated 5 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- ☆15Updated 7 years ago
- Knowledge Graph Embeddings learned from the structure and literals of knowledge graphs☆44Updated 2 years ago
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated last year
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- A system for normalizing disorder mentions in biomedical data.☆19Updated 9 years ago
- Classifying Relations via Long Short-Term Memory Networks along Biomedical Ontologies☆15Updated 2 years ago
- Repository used to collect biomedical corpus on the Internet!☆32Updated 4 years ago
- Implementation of TACL 2017 paper: Cross-Sentence N-ary Relation Extraction with Graph LSTMs. Nanyun Peng, Hoifung Poon, Chris Quirk, Kri…☆61Updated 6 years ago
- ☆11Updated 7 years ago
- Code for AttentionMeSH☆17Updated 6 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆134Updated 7 months ago
- ☆90Updated 5 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆41Updated 4 years ago
- ☆50Updated 2 years ago
- Distantly Supervised Biomedical Named Entity Recognition with Dictionary Expansion: https://ieeexplore.ieee.org/document/8983212☆12Updated 4 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- Full abstract relation extraction from biological texts with bi-affine relation attention networks☆129Updated 6 years ago
- Python library for converting between BioNLP formats☆21Updated last year
- FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.☆35Updated 4 years ago
- Knowledge graph Entity and Word Embeddings for Retrieval☆10Updated 3 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Updated 5 years ago
- Tools for working with the S800 corpus☆11Updated 4 years ago
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 4 years ago