arwhirang / recursive_chemprot
This is the open source repository of my Recursive Neural Network for the BioCreative 6 track5 - chemprot task.
☆11Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for recursive_chemprot
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated 11 months ago
- ☆35Updated 4 years ago
- Classifying Relations via Long Short-Term Memory Networks along Biomedical Ontologies☆15Updated last year
- ☆48Updated last year
- Code for AttentionMeSH☆17Updated 6 years ago
- Named Entity Recognition for biomedical entities☆47Updated last year
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆37Updated 6 years ago
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated last year
- For icibm paper☆11Updated 7 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 5 years ago
- ☆15Updated 6 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆133Updated 4 months ago
- ☆50Updated 2 years ago
- ☆11Updated 6 years ago
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 4 years ago
- Code regarding to our paper "N-ary Relation Extraction using Graph State LSTM"☆95Updated 4 years ago
- Full abstract relation extraction from biological texts with bi-affine relation attention networks☆129Updated 5 years ago
- A system for normalizing disorder mentions in biomedical data.☆19Updated 9 years ago
- Implementation of TACL 2017 paper: Cross-Sentence N-ary Relation Extraction with Graph LSTMs. Nanyun Peng, Hoifung Poon, Chris Quirk, Kri…☆61Updated 5 years ago
- ☆90Updated 5 years ago
- Repository used to collect biomedical corpus on the Internet!☆31Updated 4 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆41Updated 4 years ago
- Python library for converting between BioNLP formats☆20Updated last year
- Knowledge Graph Embeddings learned from the structure and literals of knowledge graphs☆44Updated 2 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 4 years ago
- Abbreviation definition dection library trained on PubMed abstracts☆45Updated 4 years ago
- Detecting drug-drug interaction (DDI) has become a vital part of public health safety. This project is an implementation of NLP based app…☆16Updated 7 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 5 years ago
- Distantly Supervised Biomedical Named Entity Recognition with Dictionary Expansion: https://ieeexplore.ieee.org/document/8983212☆12Updated 4 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Updated 4 years ago