Alternatives and similar repositories for MetaboAnnotatoR

Users that are interested in MetaboAnnotatoR are comparing it to the libraries listed below

• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆15Updated 2 years ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆30Updated last year
• aberHRML / classyfireR
  R Interface to the ClassyFire REST API
  ☆11Updated 10 months ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆11Updated 3 months ago
• danielatrivella / NP3_MS_Workflow
  A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis
  ☆15Updated 3 weeks ago
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• lifs-tools / goslin
  Goslin is the Grammar on succinct lipid nomenclature.
  ☆12Updated last month
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆16Updated last month
• computational-chemical-biology / ChemWalker
  ☆11Updated last year
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆10Updated last month
• sonial / KniMet
  metabolomics/lipidomics data processing
  ☆10Updated 4 years ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆16Updated 8 years ago
• aberHRML / metabolighteR
  R Interface to the Metabolights REST API
  ☆11Updated 4 months ago
• yguitton / metaMS
  data processing for MS-based metabolomics
  ☆15Updated last year
• broadinstitute / bmxp
  The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …
  ☆13Updated last month
• madeleineernst / pyMolNetEnhancer
  ☆20Updated 2 years ago
• sorenwacker / ms-peakonly
  Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
  ☆17Updated last year
• biorack / blink
  ☆11Updated 11 months ago
• eMetaboHUB / MS-CleanR
  ☆26Updated 2 years ago
• zhengfj1994 / PPGB_MS2
  ☆11Updated last year
• jcapelladesto / geoRge
  geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics
  ☆11Updated 4 years ago
• yufree / pmd
  Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
  ☆11Updated 8 months ago
• hhabra / metabCombiner
  metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation
  ☆13Updated last year
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• yufree / xcmsrocker
  Rocker image for metabolomics data analysis
  ☆13Updated 2 months ago
• CSi-Studio / G-Aligner
  G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics
  ☆17Updated last year
• kruvelab / MS2Tox
  MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS
  ☆16Updated 2 months ago
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆33Updated 4 years ago