Alternatives and similar repositories for nPYc-Toolbox

Users that are interested in nPYc-Toolbox are comparing it to the libraries listed below

• LewisResearchGroup / ms-mint
  Python library for large-scale targeted metabolomics.
  ☆22Updated 6 months ago
• secimTools / SECIMTools
  A set of metabolomics tools for use in Galaxy
  ☆11Updated 3 years ago
• fermo-metabolomics / FERMO
  Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.
  ☆32Updated 3 weeks ago
• eMetaboHUB / MS-CleanR
  ☆26Updated last year
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆30Updated 2 years ago
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• madeleineernst / pyMolNetEnhancer
  ☆21Updated 2 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• biosustain / snakemake_UmetaFlow
  Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake
  ☆28Updated 9 months ago
• computational-metabolomics / msp2db
  Convert MSP files into a database
  ☆10Updated 4 years ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆29Updated last year
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• computational-chemical-biology / ChemWalker
  ☆11Updated last year
• czbiohub-sf / Rapid-QC-MS
  Realtime quality control for mass spectrometry data acquisition
  ☆19Updated last year
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆35Updated 4 months ago
• computational-metabolomics / dimspy
  Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
  ☆21Updated 2 years ago
• SimpleNumber / HUMOS
  HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …
  ☆11Updated 7 months ago
• kentsislab / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆27Updated 7 years ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• antonvsdata / notame
  An R package for non-targeted LC-MS metabolomics
  ☆20Updated last year
• bittremieux-lab / GLEAMS
  GLEAMS is a Learned Embedding for Annotating Mass Spectra.
  ☆26Updated 2 years ago
• HaoGroup-ProtContLib / Protein-Contaminant-Libraries-for-DDA-and-DIA-Proteomics
  This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…
  ☆27Updated 11 months ago
• mandelbrot-project / memo
  Ms2 basEd saMple vectOrization (memo) package
  ☆17Updated 2 years ago
• ablab / npdtools
  Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…
  ☆28Updated 3 years ago
• mwang87 / GNPS_MASST
  ☆14Updated last month
• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆48Updated 2 years ago
• robinschmid / microbe_masst
  Using MASST or fastMASST, adding metadata onto a tree ontology for microbes
  ☆21Updated last month
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆23Updated 4 months ago
• computational-metabolomics / beamspy
  BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
  ☆18Updated 2 years ago