Understand DNA structure and how machine learning can be used to work with DNA sequence data.
☆38Jan 16, 2021Updated 5 years ago
Alternatives and similar repositories for DNA-Sequence-Machine-learning
Users that are interested in DNA-Sequence-Machine-learning are comparing it to the libraries listed below
Sorting:
- Classify DNA sequence into Binary class using different Classification algorithms.☆11Feb 24, 2024Updated 2 years ago
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence☆23Feb 9, 2026Updated 3 weeks ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, genome subcompartment☆21Apr 8, 2024Updated last year
- ☆22Jul 27, 2023Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 4 years ago
- trackc aims to produce beautiful genome tracks that are highly customizable☆16Jan 21, 2026Updated last month
- ☆13Jul 21, 2021Updated 4 years ago
- Sentieon DNAscope + Machine Learning Model☆12Mar 19, 2025Updated 11 months ago
- Differential quantification of alternative splicing events on spliced pangenome graphs☆15Jan 30, 2026Updated last month
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 3 years ago
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆16Jun 25, 2025Updated 8 months ago
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆15Feb 6, 2026Updated last month
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Prediction☆13Jun 20, 2017Updated 8 years ago
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆14Oct 23, 2024Updated last year
- Tools for DLO HiC data analyze☆16Oct 31, 2022Updated 3 years ago
- 🧬 Analyzing compression algorithms for genomic sequencing data☆12Feb 14, 2020Updated 6 years ago
- Web-Application for the cross-visualization of HiC and ChIP-seq data.☆18Feb 17, 2026Updated 2 weeks ago
- Read error correction tool for PacBio data☆12Dec 11, 2024Updated last year
- Scripts + resources for analyzing combinatorial Hi-C data☆32Nov 5, 2019Updated 6 years ago
- Recreation of the DNA Sequence Classification Paper☆12Oct 27, 2016Updated 9 years ago
- Blazing fast toolkit to work with .hic and .cool files☆42Feb 23, 2026Updated last week
- ☆19Mar 11, 2024Updated last year
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16May 17, 2022Updated 3 years ago
- 📈 DNA Sequence Visualization for Humans☆41Jul 10, 2021Updated 4 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Oct 5, 2019Updated 6 years ago
- Template for building your own portfolio☆27Jul 2, 2025Updated 8 months ago
- Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models☆23Oct 22, 2018Updated 7 years ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Jul 13, 2020Updated 5 years ago
- a user-friendly and flexible pipeline for prokaryote genome analysis☆69Updated this week
- A collection of tools for DNA modelling☆23Aug 9, 2025Updated 6 months ago
- workshop website on readthedocs☆21Sep 26, 2025Updated 5 months ago
- A command line tool to compute mapping statistics from a BAM file☆25Mar 7, 2022Updated 3 years ago
- ☆51Sep 21, 2018Updated 7 years ago
- Python library for processing and visualizing Hi-C data☆20May 31, 2020Updated 5 years ago
- Workflow for Sequenza, cellularity and ploidy☆26Aug 19, 2025Updated 6 months ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- Tokenizers and Machine Learning Models for biological sequence data☆25Sep 27, 2024Updated last year
- Academic LaTeX CV template for emerging and early-career researchers☆35Updated this week