Understand DNA structure and how machine learning can be used to work with DNA sequence data.
☆42Jan 16, 2021Updated 5 years ago
Alternatives and similar repositories for DNA-Sequence-Machine-learning
Users that are interested in DNA-Sequence-Machine-learning are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Classify DNA sequence into Binary class using different Classification algorithms.☆11Feb 24, 2024Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, genome subcompartment☆21Apr 8, 2024Updated 2 years ago
- Recreation of the DNA Sequence Classification Paper☆12Oct 27, 2016Updated 9 years ago
- ☆13Jul 21, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- ☆23Jul 27, 2023Updated 3 years ago
- Sentieon DNAscope + Machine Learning Model☆12Mar 19, 2025Updated last year
- Pipeline for Recombinant Yeast genoMEs That Identifies Markers of Engineering☆12May 13, 2024Updated 2 years ago
- 📈 DNA Sequence Visualization for Humans☆41Jul 10, 2021Updated 5 years ago
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆17Jun 25, 2025Updated last year
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Prediction☆13Jun 20, 2017Updated 9 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 5 years ago
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence☆29Apr 16, 2026Updated 4 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Web-Application for the cross-visualization of HiC and ChIP-seq data.☆20Feb 17, 2026Updated 6 months ago
- ☆11Nov 12, 2020Updated 5 years ago
- Tools for DLO HiC data analyze☆16Oct 31, 2022Updated 3 years ago
- Quantitation and visualization of differential alternative splicing events☆11May 2, 2023Updated 3 years ago
- Read error correction tool for PacBio data☆12Dec 11, 2024Updated last year
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Oct 5, 2019Updated 6 years ago
- Blazing fast toolkit to work with .hic and .cool files☆45Updated this week
- Scripts + resources for analyzing combinatorial Hi-C data☆32Nov 5, 2019Updated 6 years ago
- ☆52Sep 21, 2018Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- PPL (Pore-C PipLine) is a set of tools to process, evaluate and visualize the multi-way contacts experiment based on 3C and ONT long read…☆16Apr 22, 2025Updated last year
- Tokenizers and Machine Learning Models for biological sequence data☆25Sep 27, 2024Updated last year
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆17Feb 6, 2026Updated 6 months ago
- A collection of tools for DNA modelling☆25Jun 4, 2026Updated 2 months ago
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated 2 years ago
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆16Oct 23, 2024Updated last year
- A tool to measure bacteriophages plaque sizes☆17May 12, 2023Updated 3 years ago
- SNp Exploration and Analysis using EPigenomics data☆12Jan 14, 2025Updated last year
- DNA Archive Simulator (DNArSim) is a memory channel model that simulate the entire DNA Data Storage process: from synthesis to basecallin…☆10Dec 6, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆20Jul 13, 2020Updated 6 years ago
- Code repo for paper on Generative Adversarial Networks for Medical Imaging☆11Mar 20, 2020Updated 6 years ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆12Mar 11, 2020Updated 6 years ago
- our in-house version of ProteinMPNN☆40Feb 12, 2026Updated 6 months ago
- A collection of implementations of fair ML algorithms☆12Jan 7, 2018Updated 8 years ago
- Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models☆23Oct 22, 2018Updated 7 years ago
- Large language model Mistral for DNA☆25Sep 12, 2025Updated 11 months ago