Understand DNA structure and how machine learning can be used to work with DNA sequence data.
☆38Jan 16, 2021Updated 5 years ago
Alternatives and similar repositories for DNA-Sequence-Machine-learning
Users that are interested in DNA-Sequence-Machine-learning are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence☆26Updated this week
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆16Jun 25, 2025Updated 9 months ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, genome subcompartment☆21Apr 8, 2024Updated 2 years ago
- Recreation of the DNA Sequence Classification Paper☆12Oct 27, 2016Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆13Jul 21, 2021Updated 4 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- ☆22Jul 27, 2023Updated 2 years ago
- Pipeline for Recombinant Yeast genoMEs That Identifies Markers of Engineering☆12May 13, 2024Updated last year
- 🧬 Analyzing compression algorithms for genomic sequencing data☆12Feb 14, 2020Updated 6 years ago
- trackc aims to produce beautiful genome tracks that are highly customizable☆18Jan 21, 2026Updated 2 months ago
- 📈 DNA Sequence Visualization for Humans☆41Jul 10, 2021Updated 4 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 4 years ago
- ☆11Nov 12, 2020Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆22Dec 4, 2025Updated 4 months ago
- Quantitation and visualization of differential alternative splicing events☆11May 2, 2023Updated 2 years ago
- Tools for DLO HiC data analyze☆16Oct 31, 2022Updated 3 years ago
- Read error correction tool for PacBio data☆12Dec 11, 2024Updated last year
- Blazing fast toolkit to work with .hic and .cool files☆44Updated this week
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆15Oct 23, 2024Updated last year
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆15Feb 6, 2026Updated 2 months ago
- Web-Application for the cross-visualization of HiC and ChIP-seq data.☆18Feb 17, 2026Updated 2 months ago
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Prediction☆13Jun 20, 2017Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Scripts + resources for analyzing combinatorial Hi-C data☆32Nov 5, 2019Updated 6 years ago
- ☆52Sep 21, 2018Updated 7 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Oct 5, 2019Updated 6 years ago
- Tokenizers and Machine Learning Models for biological sequence data☆25Sep 27, 2024Updated last year
- gghic makes visualization of Hi-C/-like data easily in R☆26Jan 23, 2026Updated 2 months ago
- Analysis of DNA Sequence Classification Using Neural Networks - Bioinformatics Course Project - Winter 2022☆19Nov 13, 2023Updated 2 years ago
- ☆40Mar 29, 2026Updated 3 weeks ago
- Differential quantification of alternative splicing events on spliced pangenome graphs☆15Jan 30, 2026Updated 2 months ago
- A collection of tools for DNA modelling☆23Apr 9, 2026Updated last week
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Predicting Future Influenza Virus Sequences with Machine Learning☆31Feb 11, 2018Updated 8 years ago
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated last year
- A tool to measure bacteriophages plaque sizes☆18May 12, 2023Updated 2 years ago
- A collection of implementations of fair ML algorithms☆12Jan 7, 2018Updated 8 years ago
- An implementation of bidirectional LSTM-CRF for Named Entity Relationship on custom corpus with custom word embeddings☆14Apr 9, 2019Updated 7 years ago
- SNp Exploration and Analysis using EPigenomics data☆11Jan 14, 2025Updated last year
- Python library for processing and visualizing Hi-C data☆20May 31, 2020Updated 5 years ago