nageshsinghc4 / DNA-Sequence-Machine-learningLinks
Understand DNA structure and how machine learning can be used to work with DNA sequence data.
☆37Updated 4 years ago
Alternatives and similar repositories for DNA-Sequence-Machine-learning
Users that are interested in DNA-Sequence-Machine-learning are comparing it to the libraries listed below
Sorting:
- Codes and results from ONT dRNA benchmarking☆11Updated last year
- some resources for startup companies☆51Updated last year
- ☆33Updated 2 years ago
- Predicting gene expression levels from genomic sequences☆53Updated 5 years ago
- ☆24Updated 4 years ago
- ☆9Updated last year
- A framework for training graph neural networks to untangle assembly graphs obtained from OLC-based de novo genome assemblers.☆47Updated last month
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago
- CNN based classifier for detecting viral sequences among metagenomic contigs☆33Updated 4 years ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- Saluki, a method to predict mRNA half-lives from sequence☆25Updated 2 years ago
- Deep representation learning for disease prediction based on microbiome data☆59Updated 2 years ago
- A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…☆44Updated 2 years ago
- ☆32Updated 10 months ago
- python scripts for the Coursera Bioinformatics for Beginners☆18Updated 7 years ago
- ☆33Updated 2 years ago
- Elucidating the Utility of Genomic Elements with Neural Nets☆70Updated 7 months ago
- ☆50Updated 4 years ago
- Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…☆64Updated 2 years ago
- Computational framework to identify promoter sequences from RNA-seq datasets☆10Updated last year
- Here I show how to use Convolutional Neural Networks (CNNs) for Ancient DNA analysis☆14Updated 6 years ago
- Learning to untangle genome assembly with graph neural networks.☆72Updated 8 months ago
- jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data☆32Updated 6 years ago
- A tool for computing the coding potential of RNA transcript sequences using deep learning classification model☆54Updated 2 years ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆53Updated 4 months ago
- ☆26Updated 10 months ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.☆20Updated 7 years ago
- A tool for visualising kmers in 2D space.☆9Updated 4 months ago
- CNN architecture for predicting DNA binding sites for Transcription Factors☆52Updated 6 years ago