https://epidemiology-stan.github.io/
☆10Mar 12, 2022Updated 4 years ago
Alternatives and similar repositories for epidemiology-stan.github.io
Users that are interested in epidemiology-stan.github.io are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Sep 30, 2025Updated last year
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆28Feb 3, 2021Updated 5 years ago
- An R package for Bayes Linear emulation and history matching.☆20Aug 11, 2026Updated 2 months ago
- Materials for the course on Bayesian model building run at Second Faculty of Medicine at Charles University in Prague☆11May 6, 2024Updated 2 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆21Oct 10, 2026Updated last week
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- A package containing several useful R-functions for reading and plotting the results of Birth-Death Skyline (BDSKY) runs in BEAST2.☆12Nov 28, 2018Updated 7 years ago
- Contemporary statistical inference for infectious disease models using Stan☆16Mar 3, 2019Updated 7 years ago
- Tools and tutorials for multi-level regression and post-stratification of survey data☆11Mar 5, 2024Updated 2 years ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆19May 9, 2024Updated 2 years ago
- Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"☆13Aug 4, 2026Updated 2 months ago
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆17Oct 31, 2024Updated last year
- ☆20Jun 4, 2026Updated 4 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆15Jan 10, 2021Updated 5 years ago
- Workshop on hhh4 and the endemic-epidemic framework☆19Oct 13, 2022Updated 4 years ago
- This repository contains python implementations of scoring rules for forecasts provided in a prediction interval format.☆11Jul 31, 2020Updated 6 years ago
- Repository to the R package nowcaster, nowcasting with INLA☆25Sep 18, 2026Updated last month
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Sep 19, 2026Updated last month
- This is a read-only mirror of the CRAN R package repository. MCMCpack — Markov Chain Monte Carlo (MCMC) Package. Homepage: https://CRAN…☆13Aug 28, 2024Updated 2 years ago
- Repository for reproducing results in structured priors MRP paper☆17Jun 27, 2020Updated 6 years ago
- Derive social mixing matrices from survey data.☆44Sep 28, 2026Updated 3 weeks ago
- ☆12Jun 28, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Examples on INLA within MCMC☆12May 15, 2017Updated 9 years ago
- Graphical Analytical Pipeline Development Evironment☆13Oct 12, 2026Updated last week
- An R package to help assess the sensitivity of a Bayesian model (fitted with Stan) to the specification of its likelihood and priors☆11May 29, 2026Updated 4 months ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆23Dec 9, 2023Updated 2 years ago
- R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility☆15Mar 26, 2026Updated 6 months ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Oct 30, 2023Updated 2 years ago
- Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri☆22Oct 1, 2025Updated last year
- Nowcasting by Bayesian Smoothing☆19Jun 3, 2026Updated 4 months ago
- ☆10Jul 9, 2020Updated 6 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Apr 26, 2022Updated 4 years ago
- A curated collection of openly accessible epidemiological datasets from around the world with Python access scripts☆23Oct 8, 2026Updated last week
- Course on nowcasting and forecasting of infectious disease dynamics☆28Oct 1, 2026Updated 2 weeks ago
- ☆25Nov 2, 2022Updated 3 years ago
- Code for: The effect of human mobility and control measures on the COVID-19 epidemic in China☆22Dec 1, 2022Updated 3 years ago
- ☆30Apr 2, 2026Updated 6 months ago
- epidemia package☆50Jun 24, 2022Updated 4 years ago