Alternatives and similar repositories for epiparameter

Users that are interested in epiparameter are comparing it to the libraries listed below

• mrc-ide / epireview
  ☆30Updated last month
• WHO-Collaboratory / collaboratory-epiparameter-community
  ☆41Updated 3 weeks ago
• WHO-Collaboratory / collaboratory-epipipeline-community
  ☆14Updated last year
• adrian-lison / EpiSewer
  An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.
  ☆22Updated this week
• epinowcast / epinowcast
  Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model wit…
  ☆62Updated 2 weeks ago
• idem-lab / conmat
  Create Contact Matrices from Population Data
  ☆20Updated 2 weeks ago
• nfidd / nfidd
  Course on nowcasting and forecasting of infectious disease dynamics
  ☆21Updated 2 weeks ago
• reichlab / variant-nowcast-hub
  A repository to store COVID-19 variant nowcasts collected as a modeling hub.
  ☆18Updated this week
• ekenah / TranStat
  An R package for the analysis of infectious disease transmission data
  ☆10Updated 3 years ago
• epinowcast / epidist
  Estimate epidemiological delay distributions with brms
  ☆15Updated last week
• CDCgov / ww-inference-model
  An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case …
  ☆25Updated 8 months ago
• mac-theobio / McMasterPandemic
  SEIR+ model
  ☆19Updated last month
• FellowsFreiesWissen / computational_notebooks
  Tools to facilitate the use of computational notebooks.
  ☆36Updated last year
• cran-task-views / Epidemiology
  CRAN Task View: Epidemiology
  ☆23Updated last week
• goldingn / covid19_australia_interventions
  Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia
  ☆13Updated 2 years ago
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 3 years ago
• CDCgov / ixa
  ☆19Updated this week
• appliedepi / epirhandbook
  An R package to accompany the Epidemiology R Handbook, a free open-access R reference manual for applied epidemiologists and public healt…
  ☆48Updated 4 months ago
• epiverse-trace / simulist
  An R package for simulating line lists
  ☆10Updated 2 weeks ago
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆40Updated this week
• nicsteyn2 / NZWastewaterModelling
  ☆10Updated 11 months ago
• FelixGuenther / nc_covid19_bavaria
  ☆14Updated 4 years ago
• CDCgov / cfa-gam-rt
  R package for real-time Rt estimation with penalized splines
  ☆14Updated last week
• bbolker / bbmisc
  miscellaneous talks and small projects
  ☆11Updated this week
• mrc-ide / reactidd
  This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…
  ☆17Updated last year
• reconhub / trendbreaker
  Analysing epidemic trends using AutoML approaches.
  ☆19Updated 4 years ago
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆30Updated last month
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 3 years ago
• objornstad / ecomodelmarkdowns
  Stand alone markdowns with embedded shiny apps for various eco&epi models
  ☆24Updated 2 years ago
• rosannaclairebarnard / covidm-mtd-Omi
  Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…
  ☆12Updated 3 years ago