Wastewater Epidemic Model
☆14Jun 12, 2024Updated last year
Alternatives and similar repositories for wem
Users that are interested in wem are comparing it to the libraries listed below
Sorting:
- The Public Health Environmental Surveillance Open Data Model (PHES-ODM, or ODM). A data model, dictionary and support tools for environme…☆56Jan 23, 2026Updated last month
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆11May 4, 2021Updated 4 years ago
- Code for utilising VAE as means of doing exact MCMC inference in complex high-dimensional space☆14Jun 20, 2023Updated 2 years ago
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- An R package to help assess the sensitivity of a Bayesian model (fitted with Stan) to the specification of its likelihood and priors☆11Apr 8, 2025Updated 11 months ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Aug 31, 2022Updated 3 years ago
- Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"☆11Jul 23, 2022Updated 3 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 5 months ago
- "Swappable Module" compiler for the Stan probabilistic programming language.☆13Aug 18, 2023Updated 2 years ago
- Compile Stan models to WebAssembly.☆15May 14, 2023Updated 2 years ago
- Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.☆13Aug 11, 2022Updated 3 years ago
- PhD thesis submitted to the University of Bristol. Title: Modelling BCG vaccination in the UK: What is the impact of changing policy?☆12Jan 7, 2020Updated 6 years ago
- Short course on parametric survival analysis☆15Nov 22, 2024Updated last year
- Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"☆13May 18, 2022Updated 3 years ago
- Style data.table according to the opinions of TheDataCollective☆15Feb 1, 2023Updated 3 years ago
- Gaussian processes on graphs and lattices in Stan.☆19Mar 17, 2025Updated 11 months ago
- Infectious disease model library and utilities☆15Sep 2, 2022Updated 3 years ago
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Nov 11, 2025Updated 3 months ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- ☆44Aug 19, 2025Updated 6 months ago
- Tools for constructing and plotting Markov Random Fields in R for graphical data☆21Dec 13, 2023Updated 2 years ago
- Tools for building predictive models in epidemiology.☆16Sep 19, 2025Updated 5 months ago
- Tool-set to support Bayesian evidence synthesis in R☆25Updated this week
- Conformal Bayes with importance sampling☆23Oct 25, 2021Updated 4 years ago
- Data repository to store Canadian wastewater and other environmental surveillance data using the Environmental Surveillance for Public He…☆17Feb 26, 2026Updated last week
- Joint modeling multivariate longitudinal and time-to-event outcomes with INLA☆21Feb 18, 2026Updated 2 weeks ago
- R package to implement and visualize several epidemiological forecasting methods.☆20Jul 19, 2024Updated last year
- Workshop on hhh4 and the endemic-epidemic framework☆18Oct 13, 2022Updated 3 years ago
- 🪐 Generate "solar system" plots with {ggplot2}☆23Apr 26, 2023Updated 2 years ago
- CRAN Task View: Epidemiology☆23Feb 26, 2026Updated last week
- An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.☆23Updated this week
- R package to run Bayesian MMRMs using {brms}☆23Jul 31, 2025Updated 7 months ago
- Code for reconstructing influenza dynamics from surveillance data using evidence synthesis techniques☆21Apr 26, 2022Updated 3 years ago
- R Package - Dynamical Systems Approach to Infectious Disease Epidemiology☆26Jan 22, 2024Updated 2 years ago
- Repurposing antihypertensive drugs for the prevention of Alzheimer’s disease: a Mendelian Randomization study☆34Aug 25, 2020Updated 5 years ago
- ☆15Jan 12, 2026Updated last month
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆28Feb 3, 2021Updated 5 years ago
- This is the repository for the Literate Programming Workshop☆39Feb 6, 2024Updated 2 years ago
- Academic Writing Analytics☆10Jan 5, 2026Updated 2 months ago