phac-nml-phrsd / wem
Wastewater Epidemic Model
☆14Updated 7 months ago
Alternatives and similar repositories for wem:
Users that are interested in wem are comparing it to the libraries listed below
- An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.☆15Updated this week
- Bayesian Modelling in Epidemiology Case Line Lists☆13Updated 8 months ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆11Updated 2 years ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year
- ☆10Updated 3 months ago
- A repository to store COVID-19 variant nowcasts collected as a modeling hub.☆15Updated this week
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated last year
- ☆19Updated this week
- Basic Tools for the Analysis of Disease Outbreaks☆12Updated 5 years ago
- Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model wit…☆58Updated this week
- Some code for monkeypox☆10Updated last year
- ☆19Updated 3 years ago
- Data and forecast submission repository for the 2023 CDC West Nile virus Forecasting Challenge☆10Updated last year
- Disease outbreak reconstruction from epidemiological and genetic data☆31Updated 3 months ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆18Updated last year
- Points of Significance: Modeling infectious epidemics☆11Updated 2 months ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- R package for Bayesian nonparametric adaptive smoothing with Stan☆8Updated 4 years ago
- ☆30Updated last week
- Inference framework for serological data☆16Updated last month
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆16Updated 8 months ago
- Create Contact Matrices from Population Data☆18Updated this week
- R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…☆33Updated this week
- Covid-19 epidemiology - data and analysis☆11Updated last year
- Infectious disease model library and utilities☆15Updated 2 years ago
- Joint modeling multivariate longitudinal and time-to-event outcomes with INLA☆18Updated last week
- ☆10Updated this week
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆15Updated 5 years ago
- ☆14Updated last year
- ☆38Updated 3 weeks ago