WHO-Collaboratory / collaboratory-epiparameter-communityLinks
☆42Updated 2 months ago
Alternatives and similar repositories for collaboratory-epiparameter-community
Users that are interested in collaboratory-epiparameter-community are comparing it to the libraries listed below
Sorting:
- ☆14Updated 2 years ago
- R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…☆35Updated 2 months ago
- ☆31Updated 2 weeks ago
- An R package for the analysis of infectious disease transmission data☆10Updated 3 years ago
- An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.☆23Updated this week
- Course on nowcasting and forecasting of infectious disease dynamics☆21Updated 3 weeks ago
- Create Contact Matrices from Population Data☆20Updated this week
- SEIR+ model☆19Updated 3 months ago
- R Package for individual based epidemiological models☆30Updated 2 months ago
- A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation…☆62Updated this week
- Estimate epidemiological delay distributions with brms☆15Updated this week
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated 2 years ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- Stand alone markdowns with embedded shiny apps for various eco&epi models☆24Updated 2 years ago
- R code to replicate analyses in Clark et al 2025 (Beyond single-species models: leveraging multispecies forecasts to navigate the dynamic…☆14Updated 8 months ago
- Analysing epidemic trends using AutoML approaches.☆19Updated 4 years ago
- R package for easier interactions with the Go.Data API☆13Updated 2 years ago
- CRAN Task View: Epidemiology☆24Updated 3 weeks ago
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆20Updated last month
- Bayesian SEIR model to estimate the effects of social-distancing on COVID-19☆27Updated 4 years ago
- Tools to facilitate the use of computational notebooks.☆36Updated last year
- ☆10Updated 3 weeks ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17Updated last year
- A repository to store COVID-19 variant nowcasts collected as a modeling hub.☆19Updated this week
- miscellaneous talks and small projects☆11Updated last month
- An R package to accompany the Epidemiology R Handbook, a free open-access R reference manual for applied epidemiologists and public healt…☆48Updated 5 months ago
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Updated 2 months ago
- The case time series design☆24Updated 3 months ago
- epidemia package☆48Updated 3 years ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Updated 3 years ago