Alternatives and similar repositories for IMOD

Users that are interested in IMOD are comparing it to the libraries listed below

• bionanopatterning / scNodes
  ☆14Updated 4 months ago
• BioinfoMachineLearning / cryo2struct
  The programs for preprocessing cryo-EM density maps for machine learning
  ☆29Updated 9 months ago
• compSPI / cryoAI
  ☆43Updated last year
• ComputationalCryoEM / ASPIRE-Python
  Algorithms for Single Particle Reconstruction
  ☆54Updated this week
• alan-turing-institute / grace
  Graph Representation Analysis for Connected Embeddings
  ☆34Updated 9 months ago
• jianglab / motioncorr
  motion correction for movies recorded using direct electron detectors
  ☆14Updated 8 years ago
• NIEHS / SmartScope
  SmartScope is a framework for systematic evaluation of cryo-EM specimens
  ☆17Updated 2 months ago
• rsanchezgarc / micrograph_cleaner_em
  Cryo-EM micrograph segmentation through deep learning
  ☆21Updated last month
• ZauggGroup / DeePiCt
  Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…
  ☆36Updated last year
• nysbc / Anisotropy
  These are programs that deal with anisotropy (both resolution and sampling)
  ☆22Updated 7 years ago
• cryoem / eman2
  A scientific image processing software suite with a focus on CryoEM and CryoET
  ☆158Updated 2 weeks ago
• evanseitz / cryoEM_synthetic_generation
  Simulation of cryo-EM ensemble data from atomic models of molecules exhibiting continuous motions
  ☆14Updated 3 years ago
• juglab / cryoCARE_T2T
  Singularity image for cryo-CARE
  ☆33Updated 3 years ago
• cramerlab / warp
  ☆54Updated last year
• ml-struct-bio / cryofire
  Amortized inference for ab initio heterogeneous cryo-EM reconstruction
  ☆38Updated 2 years ago
• SMLC-NYSBC / TARDIS
  Transformer And Rapid Dimensionless Instance Segmentation
  ☆15Updated last week
• czimaginginstitute / GCtfFind
  GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
  ☆23Updated 2 months ago
• ma-gilles / recovar
  ☆33Updated last week
• AlphaCryo4D / AlphaCryo4D
  A deep manifold learning framework for 4D cryo-EM data processing for simultaneous determination of high-resolution structures and dynami…
  ☆16Updated 2 years ago
• chanzuckerberg / cryoet-data-portal
  CryoET Data Portal
  ☆24Updated last week
• turonova / cryoCAT
  Contextual Analysis Tools for cryoET and subtomogram averaging
  ☆29Updated last week
• dzyla / MRC_napari_viewer
  Cryo-EM data viewer in napari
  ☆14Updated 4 years ago
• bpowell122 / tomodrgn
  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
  ☆29Updated 6 months ago
• kuixu / awesome-cryoem
  A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
  ☆145Updated 4 years ago
• teamtomo / mmdf
  macromolecular structure files (.pdb/.mmCIF) as pandas DataFrames
  ☆8Updated 7 months ago
• SBC-Utrecht / PyTom
  PyTom software for cryo-tomogram processing
  ☆42Updated 3 months ago
• FrangakisLab / ArtiaX
  ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.
  ☆34Updated 4 months ago
• KarenUllrich / Pytorch-Backprojection
  This code accompanies "Differentiable probabilistic models of scientific imaging with the Fourier slice theorem", UAI 2019
  ☆37Updated 6 years ago
• flatironinstitute / cryoSBI
  ☆11Updated 2 weeks ago
• StochasticAnalytics / emClarity
  ☆41Updated 4 months ago