ImgLib2 integration for ClearVolume
☆12Feb 17, 2025Updated last year
Alternatives and similar repositories for imglib2-clearvolume
Users that are interested in imglib2-clearvolume are comparing it to the libraries listed below
Sorting:
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆20Mar 14, 2021Updated 4 years ago
- Legacy project superseded by https://github.com/morphonets/SNT☆13Jul 19, 2021Updated 4 years ago
- Modified version of MultiStackRegistration, for use from scripts.☆12May 18, 2022Updated 3 years ago
- sciview is a tool for visualization and interaction with ND image and mesh data☆73Feb 26, 2026Updated last week
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Jun 14, 2022Updated 3 years ago
- ☆22Oct 6, 2025Updated 4 months ago
- ☆21Sep 9, 2021Updated 4 years ago
- Simple initial setup for a gdx project which uses gradle and scala.☆20Dec 17, 2015Updated 10 years ago
- Matlab function to import ROIs from ImageJ☆27Dec 13, 2019Updated 6 years ago
- CLIJ is deprecated. Visit CLIJ2☆56Jun 12, 2021Updated 4 years ago
- ☆32Jul 31, 2025Updated 7 months ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Feb 4, 2026Updated last month
- Multiple file format reading directly into napari using pure Python☆39Oct 15, 2025Updated 4 months ago
- Multidigraph learning (MDGL) for training recurrent spiking neural networks☆14Dec 18, 2021Updated 4 years ago
- ☆11Nov 2, 2023Updated 2 years ago
- ☆14Feb 21, 2024Updated 2 years ago
- Website for the MIT/Harvard Computational Neuroscience Journal Club☆11Apr 7, 2025Updated 10 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 4 years ago
- Chaste - Cancer Heart And Soft Tissue Environment - main public repository☆17Aug 4, 2016Updated 9 years ago
- https://nutil.readthedocs.io/en/latest/☆13Feb 18, 2026Updated 2 weeks ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- Template for creating a new python repository☆13Sep 28, 2025Updated 5 months ago
- Python scripts to manipulate Relion tomo STAR files and much more...☆14Sep 12, 2025Updated 5 months ago
- Google Colab notebook for Cellpose☆10Aug 21, 2025Updated 6 months ago
- General Image Analysis of Nuclei-containing Images☆10Jul 11, 2025Updated 7 months ago
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated 7 months ago
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆11Apr 30, 2019Updated 6 years ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆10Feb 17, 2026Updated 2 weeks ago
- load an image from lif file as a numpy array☆10Jun 2, 2022Updated 3 years ago
- Workshop materials for "Images to Knowledge with ImageJ and Friends" 2020 conference☆13Apr 26, 2022Updated 3 years ago
- General framework for Bayesian inversion of continuous hierarchical models☆10Sep 20, 2021Updated 4 years ago
- Galaxy Docker Image for the HiCExplorer☆11Mar 3, 2019Updated 7 years ago
- Two-Dimensional Template Matching implemented in Python☆14Feb 20, 2026Updated last week
- A Blarb virtual machine☆14Mar 15, 2020Updated 5 years ago
- ImageJ with CPython REPL☆10Nov 5, 2018Updated 7 years ago
- Workshop materials for "I2K 2022: From Images to Knowledge" conference☆11May 3, 2022Updated 3 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- Python3 to C++11 transpiler written in C++☆13Dec 28, 2017Updated 8 years ago
- Analysis package for miniscope data☆14Dec 6, 2022Updated 3 years ago