Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of metabolites) in R.
☆24Feb 5, 2024Updated 2 years ago
Alternatives and similar repositories for metabolome-lipidome-MSDIAL
Users that are interested in metabolome-lipidome-MSDIAL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- BiomeNED main code☆12Jul 25, 2019Updated 6 years ago
- Online workflow guidelines for metabolomics☆24Apr 19, 2026Updated last week
- Compile Mass Spectral Libraries from Various Sources☆17May 3, 2024Updated last year
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆16Jun 1, 2023Updated 2 years ago
- Mass spectral library manager☆13Apr 9, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Notebooks in computational metabolomics☆15Feb 3, 2025Updated last year
- Spectral entropy for mass spectrometry data.☆36Apr 6, 2026Updated 3 weeks ago
- GC/LC-MS data analysis for environmental science☆17Apr 9, 2026Updated 2 weeks ago
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆17Feb 13, 2026Updated 2 months ago
- rMSI processing methods using C++☆11Dec 3, 2021Updated 4 years ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Apr 25, 2023Updated 3 years ago
- 《Linux 不入门到入门》网页:https://super9du.github.io/linux-primer/☆10Aug 7, 2022Updated 3 years ago
- ☆20Jul 12, 2023Updated 2 years ago
- Easy computation of Marketing Metrics in R☆28Aug 14, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Workflow4Metabolomics meta repository☆11May 23, 2025Updated 11 months ago
- ☆11Oct 6, 2025Updated 6 months ago
- A python tool to investigate cell overlaps in imaging-based spatial transcriptomics data.☆34Apr 6, 2026Updated 3 weeks ago
- Creating and using (chemical) compound databases☆19Mar 19, 2026Updated last month
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆18Jan 16, 2026Updated 3 months ago
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- A collection of awesome lipidomics tools and resources☆17Jun 23, 2022Updated 3 years ago
- Microbial community-scale metabolic modeling predicts personalized short-chain-fatty-acid production profiles in the human gut☆10Jun 25, 2024Updated last year
- An R library for estimating causal effects☆12Apr 25, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆20Jan 24, 2024Updated 2 years ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆15Dec 6, 2023Updated 2 years ago
- A repository for physico-chemical data extracted from the NIST Chemistry WebBook☆17Jul 23, 2025Updated 9 months ago
- PyMassSpec extension for searching mass spectra using NIST's Mass Spectrum Search Engine.☆22Apr 8, 2026Updated 3 weeks ago
- Tips on not repeating yourself during R package development☆34Updated this week
- Vignettes for Cardinal3 paper☆10Feb 20, 2023Updated 3 years ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Mar 23, 2021Updated 5 years ago
- ☆28Nov 30, 2023Updated 2 years ago
- The dysbiosisR package implements tools for calculating some common microbiome dysbiosis measures☆16Dec 2, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- PFAScreen is an open-source Python based non-target screening software tool to prioritize potential PFAS features in raw data from LC- o…☆15Apr 9, 2026Updated 2 weeks ago
- R package version of the splinectomy longitudinal statistical analysis tools☆17Apr 21, 2022Updated 4 years ago
- ☆21Jan 20, 2026Updated 3 months ago
- Create .mzML files through the R Console☆12Aug 27, 2025Updated 8 months ago
- Deep-Learning-Based Multivariate Curve Resolution☆14Oct 14, 2021Updated 4 years ago
- Produce scientific figures in R that look exactly how you want☆18Jan 17, 2026Updated 3 months ago
- Codebase for WHO estimates of excess mortality associated with the COVID-19 pandemic☆12Feb 25, 2023Updated 3 years ago