Deep conditional autoregressive models for genome editing sequence-to-sequence problems
☆10Jun 29, 2021Updated 4 years ago
Alternatives and similar repositories for be_predict_bystander
Users that are interested in be_predict_bystander are comparing it to the libraries listed below
Sorting:
- ☆14May 30, 2021Updated 4 years ago
- ☆58Sep 27, 2021Updated 4 years ago
- Benchmarking scripts for Gaia☆14Apr 10, 2025Updated 11 months ago
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated last year
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 2 years ago
- Heroku/Dash app for inDelphi.☆11Dec 8, 2022Updated 3 years ago
- Core code for the DeepHF prediction tool☆40Jul 23, 2019Updated 6 years ago
- An implementation of vConv layer.☆11Apr 28, 2021Updated 4 years ago
- CRISPR Indel, base edit analysis☆11Aug 1, 2020Updated 5 years ago
- Code and examples for optical pooled screens (updated protocol).☆14Jan 28, 2024Updated 2 years ago
- ggDoubleHeat: A heatmap-like visualization tool☆15Sep 12, 2025Updated 6 months ago
- Mutation rate analysis of autosomal loci☆15Jun 25, 2020Updated 5 years ago
- ☆13Jul 23, 2020Updated 5 years ago
- ☆10Jul 10, 2023Updated 2 years ago
- ☆15Aug 18, 2025Updated 7 months ago
- Numerical Linear Algebra Notes CME 302 Stanford☆25Nov 20, 2025Updated 4 months ago
- ☆11Jan 6, 2025Updated last year
- Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes☆15Apr 28, 2021Updated 4 years ago
- Python implementation of de Bruijn graph for genome assembly☆13May 24, 2014Updated 11 years ago
- Package to Score Sequences using Rule Set 3☆14Nov 10, 2025Updated 4 months ago
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆21Nov 20, 2022Updated 3 years ago
- Code repository for the manuscript: Nucleotide dependency analysis of DNA language models reveals genomic functional elements☆28Mar 13, 2025Updated last year
- AI医生☆11May 27, 2020Updated 5 years ago
- Python package to run DefensePredictor, a model that identifies proteins involved in anti-phage defense☆17Dec 17, 2025Updated 3 months ago
- a DNA assembly library☆23Aug 13, 2025Updated 7 months ago
- 基于树形条件随机场的高阶句法分析☆16Apr 28, 2022Updated 3 years ago
- 基于机器学习的发债主体违约风险预测☆21Mar 14, 2023Updated 3 years ago
- 南京信息工程大学学位论文 Typst 模板 nuist-thesis-typst☆11Mar 19, 2024Updated 2 years ago
- ☆24Jun 4, 2024Updated last year
- microRNA PREdiction From small RNA-seq data☆31Dec 28, 2017Updated 8 years ago
- 多轮中文聊天机器人，采用GPT2进行微调，清洗聊天数据110w+，采用语义相似度和文本jaccard相似度过滤回话。☆23Nov 13, 2021Updated 4 years ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19May 26, 2024Updated last year
- COVID-19 Diagnostic Processing Dashboard☆20Jun 30, 2023Updated 2 years ago
- Periodic plus smooth image decomposition, as described by Moisan (http://www.math-info.univ-paris5.fr/~moisan/papers/2009-11r.pdf)☆21Jul 28, 2020Updated 5 years ago
- Geometric analysis of crystal structures☆16Jun 16, 2022Updated 3 years ago
- IRESfinder is a python package for the identification of RNA internal ribosome entry site in eukaryotic cell☆20Aug 27, 2021Updated 4 years ago
- XGBoost 实战调参☆19Apr 3, 2020Updated 5 years ago
- Alignment-free detection of structural variations and viral integrations in circulating tumor DNA☆17Nov 11, 2021Updated 4 years ago
- 同步b站小刘时光杂货店 代码☆15Aug 27, 2021Updated 4 years ago