Parkour2: Laboratory Information Management System π©π»βπ¬ 𧬠π¨π½βπ»
β35Jun 15, 2026Updated this week
Alternatives and similar repositories for parkour2
Users that are interested in parkour2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- cfSNV: An R tool of sensitively detecting tumor mutations from cell-free DNA in bloodβ14Apr 29, 2023Updated 3 years ago
- Detect viral infection and integration sites on NGS input. Manuscript is in preparation.β10Jan 20, 2026Updated 4 months ago
- Clin-mNGS: Automated pipeline for pathogen detection from clinical metagenomic dataβ19Jun 29, 2021Updated 4 years ago
- Collection of R scripts for SARS-CoV-2 (variant) analysesβ12Mar 2, 2023Updated 3 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/β19Mar 24, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Course materials for an introduction to SARS-CoV-2 sequencing data analysisβ14Aug 15, 2024Updated last year
- β11May 14, 2025Updated last year
- Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biβ¦β18Sep 1, 2023Updated 2 years ago
- Web-based database system for flow cell management (incl. REST API)β16Mar 7, 2024Updated 2 years ago
- Snakemake workflow for neoantigen predictionβ15Sep 7, 2023Updated 2 years ago
- β17Feb 14, 2026Updated 4 months ago
- β15Apr 20, 2023Updated 3 years ago
- β20Apr 9, 2021Updated 5 years ago
- VGEA (Viral Genomes Easily Analyzed) is a pipeline for analysis of RNA virus next-generation sequencing data.β20Sep 12, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- β10Mar 31, 2023Updated 3 years ago
- PoSeiDon: positive selection detection and recombination analysis pipelineβ39Sep 22, 2025Updated 8 months ago
- luigi based workflow for analysising WGS samples collecting from different source. It will auto clustering, annotating gene or species, aβ¦β10Nov 28, 2023Updated 2 years ago
- A course in numerical methods with Python for engineers and scientists: currently 5 learning modules, with student assignments.β10Dec 6, 2017Updated 8 years ago
- R package to quickly obtain count vectors from indexed bam filesβ15May 21, 2026Updated 3 weeks ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data orβ¦β10Jun 3, 2020Updated 6 years ago
- β20Nov 18, 2021Updated 4 years ago
- Coarse-graining library that implements Force-matchingβ11Aug 31, 2020Updated 5 years ago
- Primer3Plus is an advanced web interface for primer3.β46Apr 26, 2025Updated last year
- Open source password manager - Proton Pass β’ AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- POC Nextflow pipeline to run Illumina DRAGEN softwareβ14Aug 15, 2025Updated 10 months ago
- β13Aug 2, 2024Updated last year
- FastViromeExplorer project. Forked from https://code.vt.edu/saima5/FastViromeExplorerβ15Jul 2, 2019Updated 6 years ago
- Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) sheddingβ13Jan 8, 2021Updated 5 years ago
- Web-based User Interface to run WDL bioinformatics workflows using Cromwell serverβ13Aug 28, 2024Updated last year
- An introductury course about modeling methods and simulation tools for a wide range of natural phenomena using Python and Numpyβ10May 7, 2020Updated 6 years ago
- a set of NGS pipelinesβ24Apr 30, 2026Updated last month
- How to start with Jupyter, Python, Libs, Github and Modelsβ13May 18, 2022Updated 4 years ago
- circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line driβ¦β30Dec 19, 2023Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer β’ AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Bacterial Genomics workflow for short(Illumina) and long-read (Oxford Nanopore) sequencing dataβ12Feb 20, 2026Updated 3 months ago
- β181Jun 10, 2026Updated last week
- Yet another LLM command line interfaceβ16Dec 9, 2024Updated last year
- is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reportβ¦β93Jun 9, 2026Updated last week
- LncmiRSRN: Identifying lncRNA related miRNA sponge regulatory networkβ13Feb 15, 2022Updated 4 years ago
- β12Apr 13, 2020Updated 6 years ago
- Omics: Angular + Rustβ11Jan 20, 2023Updated 3 years ago