Cardypro / StructureAnalyzerLinks
A program analyzing 3D protein structures from PDB to generate 2D binding motifs
☆15Updated 4 years ago
Alternatives and similar repositories for StructureAnalyzer
Users that are interested in StructureAnalyzer are comparing it to the libraries listed below
Sorting:
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 4 months ago
- Some scripts that I keep using over and over.☆20Updated 3 months ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆16Updated 10 months ago
- Ligand binding site prediction and virtual screening☆12Updated 6 years ago
- ESM-driven Pocket Cross Similarity☆13Updated last month
- ☆18Updated last year
- Cloud-based Drug Binding Structure Prediction☆38Updated 7 months ago
- ☆27Updated 3 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆32Updated last year
- Some notes (cookbook) for pyMol. Protein Crystallography course.☆15Updated 4 years ago
- ☆14Updated 3 years ago
- Prediction of Protein-Small molecule binding affinities☆17Updated last week
- A Deep Learning Framework for Allosteric Site Prediction☆13Updated 4 months ago
- The official codebase of peptidy, a peptide processing tool for machine learning.☆34Updated 5 months ago
- ☆30Updated 4 months ago
- MEGADOCK on Google Colaboratory☆18Updated 2 years ago
- Web cards/apps describing peptides☆30Updated 2 years ago
- De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors☆20Updated 11 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆39Updated last year
- A unified and modular interface to homology modelling software☆11Updated 2 years ago
- Pytorch implementation of Pocket2Drug: a generative deep learning model to predict binding drugs for ligand-binding sites.☆22Updated 3 years ago
- Paper for release☆11Updated 4 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆28Updated 3 weeks ago
- A bridge between Biotite and OpenMM☆15Updated 6 months ago
- ☆15Updated 2 weeks ago
- Collection of scripts that integrates docking, virtual screening, similarity and molecular modeling programs.☆26Updated last week
- FASTDock: A Pipeline for Allosteric Drug Discovery - example scripts and jupyter notebook☆18Updated 2 years ago
- This is the GitHub repository accompanying Krishnan, Anahtar, Valeri, et al., 2025☆25Updated 4 months ago
- InteractionDrawer is a JavaScript library for the drawing of highly interactive 2D ligand interaction diagrams.☆23Updated last year
- Material to run the HADDOCK antibody-antigen modelling protocol☆22Updated 2 weeks ago