UC-Davis-molecular-computing / scadnano
Web application for designing DNA structures such as DNA origami.
☆26Updated 3 weeks ago
Alternatives and similar repositories for scadnano:
Users that are interested in scadnano are comparing it to the libraries listed below
- Python scripting library for generating designs readable by scadnano.☆15Updated 3 months ago
- A GUI for automated sequence design of wireframe scaffolded DNA origami☆13Updated 3 years ago
- oxView: Visualization and editing tool for DNA/RNA nanotechnology and oxDNA/oxRNA configuration analysis☆52Updated last month
- SNUPI (Structured NUcleic-acids Programming Interface)☆11Updated 6 months ago
- A collection of tools for DNA modelling☆18Updated 8 months ago
- A new version of the code to simulate the oxDNA/oxRNA models, now equipped with Python bindings☆46Updated last week
- An interoperable Python framework for biomolecular simulation.☆97Updated this week
- Designer scaffolded DNA DX-based wireframe lattices☆14Updated 6 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆75Updated 2 months ago
- Force Fields☆56Updated this week
- An application for configuring and running simulations with OpenMM