Alternatives and similar repositories for biosynfoni:

Users that are interested in biosynfoni are comparing it to the libraries listed below

• pnnl / darkchem
  ☆32Updated 3 months ago
• merlin-ms / awesome-mass-spectral-libraries
  ☆17Updated 10 months ago
• Philipbear / msbuddy
  a python package for molecular formula analysis in MS-based small molecule studies
  ☆25Updated last month
• BAMeScience / fiora
  Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…
  ☆29Updated this week
• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆60Updated 3 weeks ago
• biorack / simile
  ☆16Updated 2 years ago
• mwang87 / NP-Classifier
  ☆21Updated 5 months ago
• JamesJeffryes / pyclassyfire
  A python client for the ClassyFire API
  ☆16Updated 4 years ago
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆15Updated 5 months ago
• XiminHu / mass-suite
  ☆24Updated last year
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆40Updated 3 months ago
• volvox292 / mass2smiles
  deep learning based prediction of structures and functional groups from MS/MS spectra
  ☆10Updated last month
• pnnl / MSAC
  ☆22Updated last year
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆44Updated 6 months ago
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆42Updated last week
• mandelbrot-project / memo
  Ms2 basEd saMple vectOrization (memo) package
  ☆17Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆41Updated 2 years ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆28Updated 3 months ago
• pluskal-lab / DreaMS
  DreaMS (Deep Representations Empowering the Annotation of Mass Spectra)
  ☆29Updated this week
• itai-levin / chemoenzymatic-askcos
  Base image providing dependencies for ASKCOS Docker images
  ☆12Updated 9 months ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆18Updated 4 months ago
• BojarLab / CandyCrunch
  Predicting glycan structure from LC-MS/MS data
  ☆24Updated last week
• Merck / PepSeA
  ☆24Updated 3 years ago
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆11Updated 3 months ago
• FelixBaensch / MORTAR
  MOlecule fRagmenTAtion fRamework
  ☆20Updated this week
• bittremieux-lab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆27Updated 2 weeks ago
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆20Updated 2 months ago
• samgoldman97 / enz-pred
  ☆17Updated 2 years ago