Alternatives and similar repositories for biosynfoni

Users that are interested in biosynfoni are comparing it to the libraries listed below

• Philipbear / msbuddy
  a python package for molecular formula analysis in MS-based small molecule studies
  ☆31Updated 2 months ago
• merlin-ms / awesome-mass-spectral-libraries
  ☆21Updated last year
• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆71Updated 3 weeks ago
• pnnl / darkchem
  ☆32Updated 9 months ago
• biorack / simile
  ☆16Updated 3 years ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆22Updated 10 months ago
• mwang87 / NP-Classifier
  ☆25Updated 2 months ago
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆18Updated 11 months ago
• HolobiomicsLab / MetaboT
  🤖 MetaboT 🍵 is an AI system that accelerates mass spectrometry-based metabolomics data mining.
  ☆19Updated last week
• XiminHu / mass-suite
  ☆27Updated last year
• idslme / IDSL_MINT
  A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
  ☆24Updated last year
• itai-levin / chemoenzymatic-askcos
  Base image providing dependencies for ASKCOS Docker images
  ☆12Updated last year
• samgoldman97 / mist
  Encoding MS/MS spectra using formula transformers for inferring molecular properties
  ☆67Updated last year
• neilswainston / FragGenie
  ☆15Updated 4 years ago
• FelixBaensch / MORTAR
  MOlecule fRagmenTAtion fRamework
  ☆25Updated this week
• bittremieux-lab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆33Updated last month
• JosieHong / 3DMolMS
  [Bioinformatics] 3DMolMS: prediction of tandem mass spectra from 3D molecular conformations
  ☆23Updated 4 months ago
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆14Updated 3 weeks ago
• pnnl / deimos
  ☆36Updated 3 months ago
• pnnl / MSAC
  ☆23Updated 5 months ago
• volvox292 / mass2smiles
  deep learning based prediction of structures and functional groups from MS/MS spectra
  ☆11Updated 7 months ago
• meowcat / MSNovelist
  ☆69Updated last year
• BojarLab / CandyCrunch
  Predicting glycan structure from LC-MS/MS data
  ☆30Updated last month
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆52Updated last week
• BAMeScience / fiora
  Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…
  ☆37Updated this week
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆32Updated last month
• madeleineernst / pyMolNetEnhancer
  ☆21Updated 2 years ago
• samgoldman97 / enz-pred
  ☆17Updated 3 years ago
• YuanyueLi / FlashEntropySearch
  Flash entropy search
  ☆16Updated last year
• JamesJeffryes / pyclassyfire
  A python client for the ClassyFire API
  ☆16Updated 5 years ago