biorack / simile
☆16Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for simile
- ☆14Updated 6 months ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆26Updated this week
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆38Updated 4 months ago
- a python package for molecular formula analysis in MS-based small molecule studies☆22Updated 3 weeks ago
- Spectral entropy for mass spectrometry data.☆25Updated 2 weeks ago
- A small library to provide peak picking for software processing mass spectrometry data☆20Updated 2 months ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆10Updated 3 weeks ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated 2 weeks ago
- Ms2 basEd saMple vectOrization (memo) package☆17Updated last year
- ☆22Updated 9 months ago
- ☆33Updated 5 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆40Updated 2 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆19Updated 6 months ago
- ☆22Updated last year
- ☆25Updated 11 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last year
- Democratizing ML in proteomics☆29Updated 2 weeks ago
- Fiora is an in silico fragmentation algorithm for small compounds that produces simulated tandem mass spectra (MS/MS). The framework empl…☆24Updated this week
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Updated last year
- TidyMS: Tools for working with MS data in untargeted metabolomics☆53Updated 4 months ago
- An open-source Python package to unify raw MS data accession and storage.☆18Updated 2 months ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 2 months ago
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 6 months ago
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 4 months ago
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆17Updated last year
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆25Updated this week
- A package to cluster and visualise MS/MS spectral data☆11Updated 3 years ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆38Updated this week
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆29Updated 2 months ago