biorack / simile
☆16Updated 2 years ago
Alternatives and similar repositories for simile:
Users that are interested in simile are comparing it to the libraries listed below
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆28Updated last month
- MS2Query - machine learning assisted library querying of MS/MS spectra☆44Updated 7 months ago
- a python package for molecular formula analysis in MS-based small molecule studies☆27Updated 2 months ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 8 months ago
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆39Updated 4 months ago
- A package to cluster and visualise MS/MS spectral data☆11Updated 4 years ago
- Spectral entropy for mass spectrometry data.☆27Updated 2 months ago
- ☆18Updated 11 months ago
- ☆23Updated last month
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆19Updated 5 months ago
- ☆25Updated last year
- Ms2 basEd saMple vectOrization (memo) package☆17Updated last year
- ☆32Updated 2 months ago
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆14Updated 5 months ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆60Updated 2 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆21Updated 3 months ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 9 months ago
- ☆20Updated last year
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆28Updated 4 months ago
- ☆25Updated last year
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆18Updated 3 weeks ago
- Democratizing ML in proteomics☆36Updated 2 weeks ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆14Updated this week
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆19Updated last year
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated 11 months ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆45Updated last month
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆26Updated last month
- Metabolome Annotation Workflow☆25Updated last year
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆16Updated 6 months ago