hcji / DeepMASS
A known-to-unknown metabolite identification workflow
☆19Updated 4 years ago
Alternatives and similar repositories for DeepMASS:
Users that are interested in DeepMASS are comparing it to the libraries listed below
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆32Updated 3 years ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- ☆11Updated 3 weeks ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆28Updated 2 months ago
- Metabolome Annotation Workflow☆25Updated 11 months ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 7 months ago
- ☆22Updated last year
- R Package for Systematic Optimization of Metabolomic Data Processing☆16Updated last year
- ☆8Updated 5 months ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆28Updated last year
- Spectral entropy for mass spectrometry data.☆24Updated 2 months ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆13Updated last year
- ☆25Updated last year
- ☆23Updated last year
- Search spectral library with entropy similarity☆20Updated 9 months ago
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆15Updated 9 months ago
- A small library to provide peak picking for software processing mass spectrometry data☆21Updated 2 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last year
- Flash entropy search☆14Updated last year
- Ultra-fast and Accurate Spectrum Matching☆25Updated last year
- Relaunch of the initial MetFrag project.☆18Updated 2 weeks ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆14Updated 7 years ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆59Updated last week
- ☆15Updated 3 years ago
- ☆11Updated 2 years ago
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 9 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆44Updated 5 months ago
- An open-source Python package to unify raw MS data accession and storage.☆19Updated this week
- asari, metabolomics data preprocessing☆44Updated this week