hcji / DeepMASS
A known-to-unknown metabolite identification workflow
☆19Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for DeepMASS
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆28Updated 3 years ago
- Metabolome Annotation Workflow☆25Updated 8 months ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆29Updated 2 months ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- ☆22Updated 9 months ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆53Updated 4 months ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆28Updated last year
- ☆22Updated last year
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆13Updated last year
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated last year
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆22Updated last year
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆56Updated this week
- Flash entropy search☆14Updated last year
- ☆14Updated 6 months ago
- ☆33Updated 5 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last year
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 6 months ago
- ☆8Updated 2 months ago
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆14Updated 6 months ago
- ☆25Updated 11 months ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆10Updated 3 weeks ago
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆32Updated last month
- MS2Query - machine learning assisted library querying of MS/MS spectra☆40Updated 2 months ago
- ☆31Updated last year
- ☆19Updated last year
- ☆15Updated 3 years ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated 2 weeks ago
- ☆16Updated 2 years ago
- Search spectral library with entropy similarity☆20Updated 6 months ago