Alternatives and similar repositories for NP-Classifier

Users that are interested in NP-Classifier are comparing it to the libraries listed below

• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆68Updated this week
• pnnl / darkchem
  ☆32Updated 8 months ago
• Philipbear / msbuddy
  a python package for molecular formula analysis in MS-based small molecule studies
  ☆30Updated last month
• samgoldman97 / mist
  Encoding MS/MS spectra using formula transformers for inferring molecular properties
  ☆64Updated last year
• pnnl / MSAC
  ☆23Updated 5 months ago
• sirius-ms / sirius
  SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…
  ☆114Updated last week
• meowcat / MSNovelist
  ☆68Updated last year
• JamesJeffryes / pyclassyfire
  A python client for the ClassyFire API
  ☆16Updated 5 years ago
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆52Updated last month
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆21Updated 3 months ago
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆46Updated 3 months ago
• lucinamay / biosynfoni
  a *biosynformatic* fingerprint to explore natural product distance and diversity
  ☆18Updated last month
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆29Updated 8 months ago
• merlin-ms / awesome-mass-spectral-libraries
  ☆20Updated last year
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆56Updated last year
• HassounLab / GNN-SOM
  Site-of-Metabolsim prediction using Graph Neural Networks.
  ☆15Updated 2 years ago
• XiminHu / mass-suite
  ☆27Updated last year
• bittremieux-lab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆31Updated 2 weeks ago
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆18Updated 10 months ago
• protwis / protwis
  Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…
  ☆42Updated this week
• mohimanilab / molDiscovery
  ☆15Updated 3 years ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆22Updated 9 months ago
• matchms / matchms
  Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.
  ☆225Updated this week
• Boehringer-Ingelheim / pyPept
  pyPept: a python library to generate atomistic 2D and 3D representations of peptides
  ☆75Updated last year
• HolobiomicsLab / MetaboT
  🤖 MetaboT 🍵 is an AI system that accelerates mass spectrometry-based metabolomics data mining.
  ☆18Updated 3 weeks ago
• pnnl / deimos
  ☆36Updated 2 months ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆43Updated 2 years ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆54Updated last week
• Novartis / pqsar2cpd
  pqsar2cpd is a deep learning algorithm for translation of activity profiles into novel molecules.
  ☆30Updated 2 years ago
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆31Updated 2 years ago