mwang87 / NP-ClassifierLinks
☆24Updated 8 months ago
Alternatives and similar repositories for NP-Classifier
Users that are interested in NP-Classifier are comparing it to the libraries listed below
Sorting:
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆18Updated 2 months ago
- ☆23Updated 3 months ago
- ☆32Updated 6 months ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆18Updated 8 months ago
- A python client for the ClassyFire API☆16Updated 5 years ago
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆23Updated last year
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆61Updated last week
- ☆25Updated 3 years ago
- a python package for molecular formula analysis in MS-based small molecule studies☆27Updated 4 months ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆49Updated 3 months ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆45Updated last month
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆71Updated 10 months ago
- Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…☆41Updated last month
- Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…☆35Updated this week
- ☆19Updated last year
- Ms2 basEd saMple vectOrization (memo) package☆17Updated 2 years ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆29Updated last month
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆50Updated last week
- ☆26Updated last year
- deep learning based prediction of structures and functional groups from MS/MS spectra☆12Updated 4 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆42Updated 2 years ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆29Updated last year
- Python package to atom map, correct and suggest enzymatic reactions☆38Updated last year
- ☆20Updated last year
- ☆66Updated 10 months ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 11 months ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆21Updated 7 months ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆21Updated last month
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆15Updated 2 years ago
- pqsar2cpd is a deep learning algorithm for translation of activity profiles into novel molecules.☆30Updated last year