laserson / pytoolsLinks
some general useful python tools for genomics
☆20Updated 4 years ago
Alternatives and similar repositories for pytools
Users that are interested in pytools are comparing it to the libraries listed below
Sorting:
- A tool for generating heatmaps from hierarchically clustered data.☆40Updated 6 years ago
- Python graph database framework for bioinformatics☆93Updated 3 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Updated last year
- Recipes for bioinformatics analyses with scikit-bio☆42Updated 8 years ago
- bioinformatics visualization tools with pyviz/bokeh☆20Updated last year
- Efficient handling of FASTQ files from Python☆51Updated last week
- EBIC - AI-based parallel biclustering algorithm☆20Updated 6 years ago
- MOVIS: A Multi-Omics Software Solution for Multi-modal Time-Series Clustering, Embedding, and Visualizing Tasks, by Aleksandar Anžel, Dom…☆10Updated 3 years ago
- Python interface to amino acid properties and IEDB☆56Updated 8 months ago
- OncoPrint visualization☆23Updated 2 years ago
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 4 years ago
- Draw genetic elements with HTML & CSS☆16Updated 8 years ago
- Example Cloud Datalab iPython Notebooks for genomics use cases.☆25Updated 7 years ago
- Tools for munging genomic data☆21Updated 5 years ago
- 📈 DNA Sequence Visualization for Humans☆40Updated 3 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 10 months ago
- High throughput, pain-free big data pipelines.☆30Updated 8 years ago
- Javascript library for visualizing genomics data with D3.☆19Updated 8 years ago
- Variant Caller Analysis Dashboard and Data Management System☆36Updated 9 years ago
- Caleydo - Visualization for Molecular Biology☆58Updated 8 years ago
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆26Updated 6 years ago
- A python package for optimizing processing pipelines using statistical design of experiments (DoE).☆24Updated 2 years ago
- A web application from the Raphael Lab for mutation annotation and genome interpretation.☆20Updated 7 years ago
- Parallel Genomic Analysis Toolkit☆14Updated 6 years ago
- Find nodes in hierarchical clustering that are statistically significant☆28Updated 7 years ago
- WebApp for DNA variants interpretation☆13Updated this week
- [Bio in Docker] Symposium 2015☆21Updated 7 years ago
- Genevieve genome report tool☆14Updated 2 years ago
- pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)☆49Updated 8 years ago
- Parses and Plots Illumina SAV files☆13Updated 6 years ago