some general useful python tools for genomics
☆20Aug 12, 2020Updated 5 years ago
Alternatives and similar repositories for pytools
Users that are interested in pytools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python toolkit to access a Zotero library☆12Feb 9, 2019Updated 7 years ago
- ☆14Aug 19, 2025Updated 11 months ago
- Linearising and de-linearising functions for `nalgebra`'s `Point`s.☆14May 5, 2023Updated 3 years ago
- HiGlass track for displaying arcs between disconnected regions☆10Dec 13, 2022Updated 3 years ago
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- RNA-Seq normalization and quantification pipeline☆12Nov 25, 2024Updated last year
- A comprehensive travel time dataset for the entire landmass of the world to the nearest town.☆16Oct 31, 2018Updated 7 years ago
- Genome browser to visualize and analyze genomic data☆14Nov 22, 2021Updated 4 years ago
- MONSDA, Modular Organizer of Nextflow and Snakemake driven hts Data Analysis☆12Jul 9, 2026Updated 2 weeks ago
- Material do curso de text mining para cientistas sociais do CPDOC☆12May 8, 2025Updated last year
- Python library to handle HiPS☆15Feb 5, 2023Updated 3 years ago
- Slides and demos from our SciPyConf 2019 talk☆13Sep 28, 2021Updated 4 years ago
- Python parser for ISAtab, a biological file format for experimental metadata☆16Nov 24, 2016Updated 9 years ago
- A python library for generating a clustered heatmap with dendrograms.☆34Mar 17, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Teaching tool for the Buckingham Pi theorem. With a terribly obvious name.☆17Apr 11, 2018Updated 8 years ago
- Finite element solutions to cryospheric problems which involve glaciers, ice sheets, and snow.☆13Jun 20, 2019Updated 7 years ago
- Open Targets Genetics UI☆15Jan 31, 2025Updated last year
- Cablemap - WikiLeaks Cablegate parser and Topic Maps converter☆15Dec 1, 2015Updated 10 years ago
- Add conda activation to an IPython kernel spec☆10Mar 12, 2019Updated 7 years ago
- ☆13Sep 4, 2025Updated 10 months ago
- A PDFMiner wrapper to ease the text extraction from pdf files.☆24Apr 25, 2013Updated 13 years ago
- Browser extension for retrieving gene information☆16Oct 27, 2025Updated 8 months ago
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- An engine for constructing PDE-based simulations using Firedrake☆21Oct 24, 2023Updated 2 years ago
- Build sourmash databases for genbank.☆10May 4, 2023Updated 3 years ago
- Draw RNA secondary structures☆10Aug 20, 2021Updated 4 years ago
- Subset of fast5 files contained in a fastq, BAM, or SAM file.☆11Mar 29, 2023Updated 3 years ago
- a short graduate population biology course☆13Feb 22, 2023Updated 3 years ago
- A WYSIWYG slides editor for reveal.js☆17May 21, 2026Updated 2 months ago
- Code for Genomes Unzipped☆20Nov 22, 2010Updated 15 years ago
- probability of mendelian error in trios.☆11Jan 27, 2016Updated 10 years ago
- ☆18Feb 25, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Installation and running Abaqus Learning/Student Edition on Linux with Wine☆15Sep 9, 2024Updated last year
- PyDDE: Python/C DDE solver☆16May 21, 2014Updated 12 years ago
- Extension to render Google Colab Form on regular Jupyter Notebooks☆21Aug 8, 2025Updated 11 months ago
- Common UI Library that powers Polestar and Voyager☆13Jan 15, 2017Updated 9 years ago
- GenomeTools: Scripts and Classes for Working with Genomic Data☆12Jun 7, 2018Updated 8 years ago
- Altair widget for Django☆17Aug 22, 2019Updated 6 years ago
- Experimental FUSE filesystem that lets you read HTTP/HTTPS/FTP files as if they were present on your own Linux box.☆22May 7, 2023Updated 3 years ago