kiharalab / ContactGAN

Related projects ⓘ

Alternatives and complementary repositories for ContactGAN

• protddg-bench / protddg-bench
  Scoring methods for predicting the DDG upon protein mutation
  ☆11Updated last year
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 8 months ago
• ohuelab / MEGADOCK-on-Colab
  MEGADOCK on Google Colaboratory
  ☆14Updated last year
• zw2x / glinter
  Graph Learning of INTER-protein contacts
  ☆9Updated 2 years ago
• Nucleus2014 / protease-gcnn-pytorch
  ☆20Updated last year
• strauchlab / scaffold_design
  ☆14Updated 8 months ago
• akulikova64 / CNN_protein_landscape
  ☆13Updated 2 years ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆31Updated 6 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆25Updated last year
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆14Updated 11 months ago
• wells-wood-research / alphafold2-multiprocessing
  Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing
  ☆22Updated 3 years ago
• DeepGraphLearning / esm-s
  Structure-Informed Protein Language Model
  ☆26Updated 9 months ago
• ratthachat / awesome-biochem-ai
  Curated list on Deep Transformers Applications on Biology and Chemistry
  ☆17Updated last year
• samgoldman97 / enzyme-datasets
  Enzyme datasets used to benchmark enzyme-substrate promiscuity models
  ☆29Updated 3 years ago
• psipred / DeepMetaPSICOV
  Deep ResNet-based protein contact prediction
  ☆19Updated 4 years ago
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆38Updated last year
• pepamengual / UEP
  ☆9Updated last year
• Graylab / MaskedProteinEnT
  ☆11Updated last month
• tommyhuangthu / EvoEF2
  a fast and accurate physical energy function extended from EvoEF for protein sequence design
  ☆25Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆33Updated 2 months ago
• Faezov / PDBrenum
  ☆27Updated 6 months ago
• sebastiandaberdaku / AntibodyInterfacePrediction
  software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"
  ☆12Updated 3 years ago
• Furman-Lab / PatchMAN
  ☆24Updated 3 months ago
• Degiacomi-Lab / biobox
  a toolbox for the manipulation, modelling and analysis of molecular structures
  ☆24Updated last month
• FangpingWan / DeepCPI
  ☆14Updated 4 years ago
• multicom-toolbox / CONFOLD2
  Improved ab initio protein structure reconstruction
  ☆15Updated 6 years ago
• WangLabforComputationalBiology / NanoBERTa-ASP
  Predicting Nanobody Binding Epitopes Based on a Pretrained RoBERTa-based Model
  ☆13Updated 5 months ago
• ekraka / SSnet
  ☆19Updated 3 years ago
• a-r-j / CPDB
  Cython implementation of PDB -> DataFrame parsing
  ☆22Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆24Updated last month