kensho-technologies / sequence_align
Efficient implementations of Needleman-Wunsch and other sequence alignment algorithms written in Rust with Python bindings via PyO3.
☆71Updated last month
Alternatives and similar repositories for sequence_align:
Users that are interested in sequence_align are comparing it to the libraries listed below
- Collection of succinct data structures in Rust☆96Updated last month
- Modular Rust transformer/LLM library using Candle☆36Updated 11 months ago
- A small rust-based data loader☆24Updated 4 months ago
- Rust edit distance routines accelerated using SIMD. Supports fast Hamming, Levenshtein, restricted Damerau-Levenshtein, etc. distance cal…☆108Updated 2 years ago
- Rust implementation of probminhash, superminhash and hyperloglog sketching algorithms☆30Updated 3 weeks ago
- Random variables for Rust☆18Updated this week
- Python and Rust library for loading, saving, and manipulating taxonomic trees☆37Updated last week
- Graph model execution API for Candle☆13Updated 5 months ago
- A Rust implementation of the Quad Wavelet Tree☆40Updated last week
- Rust wrappers for NGT approximate nearest neighbor search☆38Updated 11 months ago
- Rust library providing fast language model queries in compressed space☆24Updated 2 years ago
- A library for easy, fast, and efficient reading & writing of PLINK Bed files☆75Updated 3 weeks ago
- Simple succinct data structures (in Rust)☆50Updated 4 months ago
- Hardware go brrr bounded context suffix array construction algorithm☆18Updated last year
- Exon is an OLAP query engine specifically for biology and life science applications.☆62Updated last month
- Fast DNA manipulation for Rust and Python☆55Updated last week
- 🦀 A Rust implementation of a RoBERTa classification model for the SNLI dataset☆13Updated 3 years ago
- Rust binding to crfsuite☆25Updated 3 years ago
- Neural syntax annotator, supporting sequence labeling, lemmatization, and dependency parsing.☆75Updated last year
- Linear Algebra in Rust☆13Updated 2 months ago
- Rust implementation of Needleman-Wunsch & Smith-Waterman sequence alignment☆20Updated 2 years ago
- Rust crate for some audio utilities☆22Updated last month
- Locality Sensitive Hashing in Rust with Python bindings☆114Updated last year
- Library for fast text representation and classification.☆28Updated last year
- Rapid fuzzy string matching in Rust using various string metrics☆53Updated 9 months ago
- Rust bindings to minimap2 library☆93Updated 3 months ago
- Parallel Construction of Suffix Arrays in Rust☆23Updated 3 weeks ago
- ☆19Updated 6 months ago
- A little library of bit-based data structures.☆15Updated last month
- Locality Sensitive Hashing☆73Updated last year