Collection of succinct data structures in Rust
☆109Aug 31, 2026Updated 3 weeks ago
Alternatives and similar repositories for sucds
Users that are interested in sucds are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Succinct data structures using very efficient rank and select☆134Aug 10, 2026Updated last month
- A Rust implementation of the Quad Wavelet Tree☆57Jul 8, 2026Updated 2 months ago
- Simple succinct data structures (in Rust)☆55Sep 14, 2026Updated last week
- Optimal distance lower bound k-mer sampling.☆12Jun 19, 2024Updated 2 years ago
- Rust library of fast and compact string dictionary using Front-Coding☆12Mar 27, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- String Visualizer☆13Sep 12, 2026Updated last week
- ☆21Dec 26, 2025Updated 8 months ago
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆44Nov 18, 2023Updated 2 years ago
- Rust implementation of the Haskell Rampart library that determines how intervals relate to each other.☆11Apr 21, 2022Updated 4 years ago
- Iterate over minimizers of a DNA sequence☆33Jul 12, 2024Updated 2 years ago
- Rust libraries and programs focused on succinct data structures☆173Updated this week
- Rust implementations of succinct data structures☆79Sep 15, 2026Updated last week
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆29Jul 12, 2026Updated 2 months ago
- ☆19Jul 15, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- BAM/SAM/CRAM/FASTA reader, pileup engine, BCF/BAM writing☆29Updated this week
- Rust library providing fast language model queries in compressed space☆25Oct 1, 2022Updated 3 years ago
- Pairwise nucleotide alignment benchmark of Rust bindings☆32Jul 27, 2023Updated 3 years ago
- ProphAsm – a rapid computation of simplitigs directly from k-mer sets☆25Feb 17, 2023Updated 3 years ago
- vector illustrations of BWT based searching on small strings☆16Apr 29, 2019Updated 7 years ago
- Single-cache-miss rank queries over size 2 and 4 alphabets. 2x faster than all other Rust crates.☆18Apr 1, 2026Updated 5 months ago
- Rust in bioinformatics and computational biology☆19Oct 22, 2022Updated 3 years ago
- Compacted and colored de Bruijn graph construction and querying☆101Updated this week
- Rust implementation of SIF and uSIF: Simple and fast sentence embedding☆19Jan 22, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Benchmark of Minimal Perfect Hash Function Algorithms.☆39Dec 20, 2022Updated 3 years ago
- Benchmarking pairwise aligners☆38Aug 26, 2026Updated 3 weeks ago
- Fast and Memory Efficient Genome Sketching via HyperLogLog, HyperMinHash, UltraLogLog and ExaLogLog☆22Aug 19, 2026Updated last month
- C++17 implementation of memory-efficient dynamic tries☆58Feb 15, 2022Updated 4 years ago
- PtrHash minimal perfect hash function☆103Aug 28, 2026Updated 3 weeks ago
- Simple and transparent support for compressed files.☆81Sep 9, 2026Updated last week
- A small, auxiliary index to massively improve parallel fastq parsing☆32Mar 6, 2026Updated 6 months ago
- Bicriteria Data Compressor☆15Dec 9, 2017Updated 8 years ago
- Code for the paper Succinct k-mer Set Representations Using Subset Rank Queries on the Spectral Burrows-Wheeler Transform (SBWT)☆24Mar 13, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A very fast interval tree data structure☆137Feb 3, 2025Updated last year
- String algorithm visualizations☆14Feb 7, 2023Updated 3 years ago
- Succinct Data Structures for Rust☆58Jun 8, 2025Updated last year
- ☆13Jul 15, 2025Updated last year
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated 2 years ago
- kmer-counter based on kache-hash☆19Sep 15, 2026Updated last week
- PCA in rust☆16Jul 30, 2023Updated 3 years ago