A software toolkit for the interconversion of standard data models for phenotypic data
☆16Jul 19, 2026Updated this week
Alternatives and similar repositories for convert-pheno
Users that are interested in convert-pheno are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for the family history/pedigree project☆13Jun 17, 2026Updated last month
- Repository for the GA4GH phenopacket schema☆97Jun 17, 2026Updated last month
- Unified repository for the GA4GH Beacon v2 API standard☆33Jul 1, 2026Updated 3 weeks ago
- A vocabulary about the processes, entities, and agents involved in the curation of semantic mappings☆15Jun 10, 2026Updated last month
- Documentation and tutorials on using AWS for biomedical research☆19Jun 10, 2026Updated last month
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- protobuf-pydantic-gen is a Python code generator that turns Protocol Buffer schemas into Pydantic and SQLModel models. It keeps protobuf …☆19Jun 28, 2026Updated 3 weeks ago
- An app and library for building, conversion, and validation of GA4GH Phenopackets.☆18Jun 15, 2026Updated last month
- deploy a snakemake pipeline directly from version control (under development)☆26Jun 18, 2026Updated last month
- Medical action ontology☆64Jan 15, 2026Updated 6 months ago
- Clinical Whole Genome and Exome Sequencing Pipeline☆31Oct 27, 2025Updated 8 months ago
- hail-based pipelines for annotating variant callsets and exporting them to clickhouse☆23Jul 13, 2026Updated last week
- This repository contains the code developed for the NanOlympicsMod project.☆12Jan 29, 2024Updated 2 years ago
- ☆15Jul 14, 2026Updated last week
- Introduction to Cloud Computing for Genomics☆21Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆38Jul 10, 2024Updated 2 years ago
- A serverless implementation of the FHIR standard that enables users to focus more on their business needs/uniqueness rather than the FHIR…☆39Jan 31, 2024Updated 2 years ago
- Semantic search engine for OHDSI vocabulary☆20Jul 15, 2026Updated last week
- ☆14Jun 15, 2026Updated last month
- A Cytoscape.js extension for the hierarchical clustering algorithm☆10Jul 26, 2017Updated 8 years ago
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated 3 months ago
- LinuxForHealth Data Flows☆26Jun 8, 2022Updated 4 years ago
- Workflow Execution Service Backend☆21Updated this week
- Genome scale metabolic models in SBML format☆11Nov 16, 2021Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A front end for elasticsearch written in plotly dash☆10Nov 9, 2023Updated 2 years ago
- Ontoclick - A web browser extension to turn highlighted text into a proper Ontology term.☆13Jun 2, 2023Updated 3 years ago
- A python library for calculating semantic similarity between patients in N3C☆14Oct 5, 2022Updated 3 years ago
- A rules-based transformation engine that allows exporting data in REDCap as FHIR resources.☆12Apr 12, 2023Updated 3 years ago
- ☆24Nov 30, 2020Updated 5 years ago
- customized dash NGL viewer☆12Jan 6, 2023Updated 3 years ago
- Lecture notes/book in progress on computing for conservation genomics☆39Jan 29, 2024Updated 2 years ago
- WordPress plugin that makes building analytics friendly links quick and easy.☆11Mar 29, 2026Updated 3 months ago
- A script to run HLA typing tools from next generation sequencing data☆12Jan 4, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A Mendelian approach to variant effect prediction built in keras☆20Nov 3, 2025Updated 8 months ago
- Semantic data model of the set of common data elements for rare disease registration☆12Oct 26, 2023Updated 2 years ago
- Identification of Human Phenotype Entities☆11Nov 2, 2018Updated 7 years ago
- Multiple simultaneous, stable, resumable large file uploads for Dash using resumable.js☆13Jun 8, 2019Updated 7 years ago
- A Nextflow workflow for HLA typing using HLA-HD☆15Jul 3, 2024Updated 2 years ago
- A3 - FHIR-native ETL+Q Prototype☆14Dec 14, 2020Updated 5 years ago
- Metadata model and schemas for the EJP virtual platform☆18Aug 29, 2024Updated last year