maris205 / dnagpt
GPT lanuage model for dna sequence
☆18Updated 4 months ago
Alternatives and similar repositories for dnagpt:
Users that are interested in dnagpt are comparing it to the libraries listed below
- ☆39Updated last year
- Explore a comprehensive collection of basic theories, applications, papers, and best practices about Large Language Models (LLMs) in geno…☆45Updated this week
- ☆21Updated last month
- A Biological Foundation Model Bridging the Gap between Molecular Sequences Through Central Dogma☆25Updated 3 weeks ago
- RiboNucleic Acid (RNA) Language Model☆92Updated 2 weeks ago
- Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".☆55Updated 3 months ago
- Nature Methods: RNA foundation model (together with RhoFold)☆256Updated 4 months ago
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆360Updated 3 months ago
- Primary RNA sequence model☆35Updated 10 months ago
- DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models☆94Updated 2 months ago
- A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.☆206Updated last month
- ☆9Updated last year
- ☆78Updated 6 months ago
- Benchmarks for classification of genomic sequences☆139Updated 3 weeks ago
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆112Updated 5 months ago
- GeneCompass☆74Updated 8 months ago
- Large Language Models in Protein: A Comprehensive Survey☆67Updated last week
- ☆294Updated last year
- RNA-seq prediction with deep convolutional neural networks.☆135Updated last week
- The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.☆205Updated 2 weeks ago
- Multi-Teacher Distillation for Protein embedding☆10Updated 10 months ago
- ☆253Updated 2 months ago
- Repository for mRNA Paper and CodonBERT publication.☆126Updated 9 months ago
- ☆41Updated 3 years ago
- Generative Pretraining from Transcriptomes☆12Updated 2 years ago
- ☆57Updated last year
- ☆27Updated last year
- ☆305Updated last month
- ☆29Updated 6 months ago
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆79Updated last year