maris205 / dnagpt
GPT lanuage model for dna sequence
☆15Updated last year
Related projects: ⓘ
- ☆30Updated last year
- ☆129Updated last month
- Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".☆36Updated 3 months ago
- ☆13Updated 3 months ago
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆192Updated last month
- RNA foundation model☆189Updated 5 months ago
- [ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding☆141Updated last year
- RiboNucleic Acid (RNA) Language Model☆56Updated 4 months ago
- Primary RNA sequence model☆25Updated 4 months ago
- Reusability report of scBERT☆12Updated 2 months ago
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆61Updated 5 months ago
- ☆25Updated 7 months ago
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆246Updated 3 weeks ago
- ☆40Updated 2 years ago
- Cell2Sentence turns scRNA-seq data into text for LLM training.☆82Updated 2 weeks ago
- Benchmarks for classification of genomic sequences☆107Updated 7 months ago
- Exploring Evolution-aware & free protein language models as protein function predictors☆57Updated last year
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆83Updated 11 months ago
- A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.☆108Updated this week
- The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)☆31Updated last year
- Contextualizing protein representations using deep learning on protein networks and single-cell data☆67Updated last week
- [ICLR 2024] Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models☆231Updated 4 months ago
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆27Updated 2 months ago
- Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through M…☆140Updated 2 weeks ago
- The LinearDesign mRNA design software.☆147Updated 3 months ago
- Paper collection for single cell foundation models☆27Updated 6 months ago
- ☆230Updated last month
- ☆166Updated 6 months ago
- ☆197Updated last month
- Scientific Large Language Models: A Survey on Biological & Chemical Domains☆211Updated last month