ciceklab / RNAGENLinks
A generative adversarial network-based model to generate synthetic RNA sequences to target proteins
☆11Updated 4 months ago
Alternatives and similar repositories for RNAGEN
Users that are interested in RNAGEN are comparing it to the libraries listed below
Sorting:
- Nature Methods: RNA foundation model (together with RhoFold)☆288Updated last month
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆20Updated 2 months ago
- Bilingual Language Model for Protein Sequence and Structure☆258Updated 6 months ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆274Updated last month
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆48Updated 9 months ago
- ☆90Updated 9 months ago
- RiboNucleic Acid (RNA) Language Model☆115Updated last month
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆21Updated 3 weeks ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆64Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆100Updated this week
- Efficient evolution from protein language models☆211Updated last year
- TEIM: TCR-Epitope Interaction Modeling☆50Updated last year
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆152Updated last year
- ☆55Updated last year
- ☆109Updated last year
- open source code for Tencent tFold☆106Updated 4 months ago
- In silico directed evolution of peptide binders with AlphaFold☆209Updated last month
- The LinearDesign mRNA design software.☆187Updated last year
- ☆16Updated 3 years ago
- ☆332Updated 11 months ago
- List of computational protein design research labs☆185Updated 5 months ago
- ☆167Updated 3 years ago
- SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction☆200Updated 3 weeks ago
- Rifdock Library for Conformational Search☆160Updated last year
- Code for ColabDock paper☆141Updated 2 months ago
- CLEAN: a contrastive learning model for high-quality functional prediction of proteins☆276Updated 3 months ago
- Convenience Python APIs for antibody numbering using ANARCI☆101Updated 2 months ago
- Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic mo…☆168Updated 2 years ago
- ☆244Updated 3 months ago
- Geometric deep learning of protein–DNA binding specificity☆77Updated 4 months ago