jdanial / ASAPLinks
Automated Structures Analysis Program
☆8Updated 4 years ago
Alternatives and similar repositories for ASAP
Users that are interested in ASAP are comparing it to the libraries listed below
Sorting:
- This is the supplementary code for Dark sectioning. And it is private now☆33Updated last month
- Deconvolution of widefield microscopy images and generation of point spread functions☆49Updated 2 weeks ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 9 months ago
- ☆31Updated last year
- An Ilastik-like interactive pixel classifier.☆16Updated 11 months ago
- STORM movie analysis code☆120Updated last year
- Detection of Molecules plugin for ImageJ, Utrecht University☆15Updated 2 years ago
- Multiple-particle tracking designed to (1) track dense particle fields, (2) close gaps in particle trajectories resulting from detection …☆50Updated 3 weeks ago
- A collection of tools for painting super-resolution images☆128Updated 3 weeks ago
- MSSR Plugin☆13Updated 9 months ago
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated 8 months ago
- Automated mitochondrial segmentation and tracking.☆33Updated 3 years ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆80Updated 3 months ago
- Fiji's plugin for colocalization analysis☆26Updated 5 months ago
- ☆12Updated 4 years ago
- ☆51Updated 3 months ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆41Updated 9 months ago
- CellProfiler tutorial pipelines and images☆93Updated this week
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- A python library for advanced lattice light-sheet image analysis☆21Updated 4 years ago
- A platform for compiling, analyzing, and exploring tracking data☆46Updated 4 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 3 months ago
- ☆75Updated this week
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆74Updated 4 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 3 weeks ago
- Guides and code for 3D nuclear instance segmentation☆22Updated last month
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆144Updated 5 months ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi …☆22Updated last year