Alternatives and similar repositories for DoM_Utrecht

Users that are interested in DoM_Utrecht are comparing it to the libraries listed below

• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆25Updated last month
• dlegland / mathematical_morphology_with_MorphoLibJ
  A collection of demonstration materials for MorphoLibJ.
  ☆12Updated 2 years ago
• haesleinhuepf / devbio-napari
  ☆51Updated 7 months ago
• tferr / Scripts
  Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ
  ☆26Updated 3 years ago
• macronucleus / Chromagnon
  Image correction software for chromatic shifts in fluorescence microscopic images
  ☆25Updated last month
• pymmcore-plus / napari-micromanager
  GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets
  ☆73Updated last week
• haesleinhuepf / imagejmacromarkdown
  Generate markdown notebooks from ImageJ Macro
  ☆26Updated 4 years ago
• dbsb-juntendo / descSPIM
  User-affordable and versatile light-sheet microscopy system for cleared specimens
  ☆25Updated 8 months ago
• adanog / MSSR
  MSSR Plugin
  ☆14Updated last year
• BIOP / coLoc
  A Board Game to teach co-localization analysis
  ☆13Updated last year
• aelefebv / Mitometer
  Automated mitochondrial segmentation and tracking.
  ☆33Updated 4 years ago
• UU-cellbiology / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆29Updated 2 weeks ago
• BiAPoL / Image-data-science-with-Python-and-Napari-EPFL2022
  ☆16Updated 2 years ago
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 7 months ago
• rosalindfranklininstitute / RedLionfish
  ☆36Updated last year
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆23Updated 3 months ago
• kwolbachia / Visualization_toolset
  Imagej toolset to ease hyperstacks visualization and handling
  ☆23Updated last year
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆54Updated 7 months ago
• HenriquesLab / NanoPyx
  Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
  ☆88Updated last week
• quokka79 / DavLUT
  Generates colormaps (lookup tables) for MATLAB & ImageJ
  ☆12Updated 7 years ago
• ariel-waisman / LabelsToROIs
  A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification
  ☆23Updated 4 years ago
• aherbert / gdsc-smlm
  GDSC Single Molecule Light Microscopy ImageJ Plugins
  ☆16Updated last week
• pymmcore-plus / useq-schema
  An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.
  ☆20Updated last week
• kwolbachia / KTZ-LUTs
  Handmade ImageJ / Fiji LUTs for microscopy, scientific good visualization and art.
  ☆13Updated 11 months ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆71Updated last week
• sofroniewn / napari-training-course
  Lectures for a napari training course
  ☆51Updated 2 years ago
• CamachoDejay / teaching-bioimage-analysis-python
  A place to collect information used in lectures, demos, workshops, etc.
  ☆17Updated last year
• maurosilber / binlets
  Denoising via adaptive binning.
  ☆12Updated last year
• pylattice / pyLattice
  A python library for advanced lattice light-sheet image analysis
  ☆21Updated 5 years ago
• dwaithe / ONBI_image_analysis
  This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course
  ☆18Updated 8 years ago