A python library for advanced lattice light-sheet image analysis
☆21Sep 9, 2020Updated 5 years ago
Alternatives and similar repositories for pyLattice
Users that are interested in pyLattice are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)☆27Updated this week
- A napari plugin to analysis point spread functions.☆12Mar 28, 2025Updated 11 months ago
- Lattice light-sheet post-processing utility.☆30Mar 2, 2026Updated 3 weeks ago
- SLM binary mask generator for Lattice Light Sheet microscopy☆12Dec 2, 2021Updated 4 years ago
- Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery☆14Apr 10, 2025Updated 11 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Noise Correction Algorithm for sCMOS cameras☆28Jan 15, 2020Updated 6 years ago
- AutoTx - an intelligent background file transfer service for Windows.☆28Feb 13, 2026Updated last month
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Mar 13, 2023Updated 3 years ago
- Library for producing and processing on the Adaptive Particle Representation (APR).☆51Jan 20, 2026Updated 2 months ago
- A flexible Python-based GUI for stereotaxic experiment planning.☆12Feb 4, 2026Updated last month
- SSPIM is a pattern producer for gray and binary spatial light modulators.☆30Jun 18, 2023Updated 2 years ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- ☆24Feb 12, 2026Updated last month
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Oct 17, 2023Updated 2 years ago
- ☆37Mar 22, 2024Updated 2 years ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆72Sep 29, 2024Updated last year
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆21Aug 21, 2024Updated last year
- ☆51Dec 9, 2025Updated 3 months ago
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆17Feb 6, 2026Updated last month
- 3D shape analysis using deep learning☆31Oct 8, 2025Updated 5 months ago
- Galaxy Image Analysis is an ELIXIR Service for computer-based image analysis in Galaxy.☆21Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆23Feb 2, 2022Updated 4 years ago
- GPU-accelerated image processing using CLIJ via pyimagej in python☆10Jan 8, 2021Updated 5 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 3 weeks ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆26Jul 3, 2020Updated 5 years ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Mar 4, 2026Updated 3 weeks ago
- Matlab tools which come in handy in a couple of situations☆23Mar 3, 2014Updated 12 years ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆31Oct 13, 2023Updated 2 years ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Oct 10, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Python package for optical flow estimation☆15Dec 25, 2022Updated 3 years ago
- CuPy implementations of image and signal processing functions from NumPy, SciPy and scikit-image☆46Jul 20, 2021Updated 4 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Jun 21, 2024Updated last year
- HiLo microscopy reconstruction with NLM denoising☆10Jan 28, 2025Updated last year
- The 'example_data.adat' is intended to provide existing and prospective SomaLogic customers an example data file to enable analysis prepa…☆14Feb 11, 2026Updated last month
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 2 months ago
- General-purpouse camera capture plugin for data streaming to napari☆26Mar 18, 2024Updated 2 years ago