pylattice / pyLatticeLinks
A python library for advanced lattice light-sheet image analysis
☆21Updated 5 years ago
Alternatives and similar repositories for pyLattice
Users that are interested in pyLattice are comparing it to the libraries listed below
Sorting:
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 6 months ago
- ☆35Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆68Updated last month
- A napari plugin to analysis point spread functions.☆13Updated 6 months ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- python tools for BigDataViewer☆22Updated 9 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated last month
- ☆46Updated last week
- Adaptive Optics plugin for MicroManager☆12Updated 3 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 5 months ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated this week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- ☆13Updated 5 years ago
- Tools for distributed alignment of massive images☆86Updated 3 weeks ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆84Updated last week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 5 months ago
- MultiModal Big Image Data Sharing and Exploration☆17Updated 2 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 3 months ago
- Dataset EXploration & Processing☆32Updated 2 years ago
- ☆51Updated 5 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆29Updated 5 months ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 6 years ago
- Particle tracking by solving linear assignment problem.☆57Updated last week
- Acquire: a multi-camera video streaming software focusing on microscopy☆22Updated 11 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated 2 weeks ago
- Visualizing feature measurements on label images in napari☆10Updated last year