Fast and Accurate 3D PSF Computation for Fluorescence Microscopy
☆48Oct 28, 2025Updated 4 months ago
Alternatives and similar repositories for MicroscPSF-Py
Users that are interested in MicroscPSF-Py are comparing it to the libraries listed below
Sorting:
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆54May 20, 2024Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- code of the registration and deconvolution project☆36Jun 10, 2021Updated 4 years ago
- python functions for simulating optical transfer functions☆81Apr 8, 2024Updated last year
- Noise Correction Algorithm for sCMOS cameras☆28Jan 15, 2020Updated 6 years ago
- Arduino-based microscope autofocus control☆15Sep 18, 2023Updated 2 years ago
- Single-Molecule Localization Microscopy - Software Benchmarking - Challenge 2016☆18Jan 26, 2019Updated 7 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆29Oct 28, 2025Updated 4 months ago
- Lattice light-sheet post-processing utility.☆30Feb 2, 2026Updated 3 weeks ago
- A Java software package to generate realistic 3D microscope Point-Spread Function (PSF)☆16Jul 16, 2019Updated 6 years ago
- Automatically exported from code.google.com/p/iocbio☆16Aug 5, 2015Updated 10 years ago
- Tool for precise, interactive, fast and scalable FISH spot detection☆50Feb 4, 2025Updated last year
- ☆36Mar 22, 2024Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Mar 2, 2019Updated 6 years ago
- Microscope control software☆68Feb 13, 2025Updated last year
- GPU accelerated image/volume processing in Python☆113Feb 10, 2026Updated 2 weeks ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆39Sep 29, 2018Updated 7 years ago
- Simple demo of structured illumination microscopy image fusion via Richardson-Lucy deconvolution☆23Dec 12, 2017Updated 8 years ago
- Cell Segmenter using Machine Learning☆10Aug 1, 2023Updated 2 years ago
- Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy☆98Feb 16, 2026Updated last week
- ☆68Apr 23, 2021Updated 4 years ago
- An interactive image processing program for biologists written in Python.☆25Sep 4, 2025Updated 5 months ago
- ☆23Mar 26, 2021Updated 4 years ago
- Smooth 2D manifold extraction from 3D image stack☆22Mar 18, 2018Updated 7 years ago
- Montaging for microscopy imaging files☆30Nov 15, 2025Updated 3 months ago
- Image restoration for fluorescence microscopy☆326Dec 8, 2025Updated 2 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Feb 2, 2026Updated 3 weeks ago
- Github Pages☆13Apr 29, 2024Updated last year
- Running ImJoy plugins in Jupyter notebooks☆11Jan 10, 2023Updated 3 years ago
- ☆24Aug 27, 2020Updated 5 years ago
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆46Nov 13, 2025Updated 3 months ago
- DeepSpot is a deep learning method for the enhancement of mRNA fluorescent spots in microscopy images☆15Dec 1, 2021Updated 4 years ago
- tipi4icy is a collection of Icy plugins based on TiPi☆11Oct 17, 2023Updated 2 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆26Jul 3, 2020Updated 5 years ago
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆88Aug 29, 2025Updated 5 months ago
- Dataset for Natural Focus Blurr Assessment in Digital Pathology☆15Nov 19, 2019Updated 6 years ago
- Commands and Classes for interfacing between Imaris and Fiji☆13Sep 30, 2024Updated last year
- Bluestein Method☆39Apr 12, 2022Updated 3 years ago