jamshed / CaPS-SALinks
Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays
☆16Updated 4 months ago
Alternatives and similar repositories for CaPS-SA
Users that are interested in CaPS-SA are comparing it to the libraries listed below
Sorting:
- Code for the paper Succinct k-mer Set Representations Using Subset Rank Queries on the Spectral Burrows-Wheeler Transform (SBWT)☆24Updated 8 months ago
- Efficient construction of the BWT using string compression☆20Updated 5 months ago
- Fast, Cache-Efficient, and Scalable Queries on Pangenomes☆34Updated last week
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆27Updated 6 months ago