Xinglab / Myc-regulated_AS_PrCa_paperLinks
Scripts for plotting figures and running analysis throughout the manuscript
☆11Updated 4 years ago
Alternatives and similar repositories for Myc-regulated_AS_PrCa_paper
Users that are interested in Myc-regulated_AS_PrCa_paper are comparing it to the libraries listed below
Sorting:
- ☆13Updated 5 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆19Updated 8 months ago
- ☆24Updated 4 years ago
- TWAS-pipeline☆24Updated 4 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- Readme☆10Updated 5 years ago
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆13Updated 6 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 3 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- LncmiRSRN: Identifying lncRNA related miRNA sponge regulatory network☆13Updated 3 years ago
- Fine-mapping with infinitesimal effects☆20Updated 7 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- ☆16Updated 2 years ago
- shared scripts in Lu Lab @ Tsinghua University☆14Updated 7 years ago
- Codes for our paper "Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming" published by Cell S…☆11Updated 5 years ago
- Quality control steps for GWAS☆26Updated 2 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Updated 5 months ago
- ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnr…☆15Updated 3 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 2 months ago
- ☆12Updated 2 years ago
- ☆17Updated 5 years ago
- ☆29Updated 2 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Updated 4 years ago
- ☆23Updated last week
- An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests☆13Updated 7 months ago
- ggplot2-based Manhattan plot☆12Updated 3 years ago
- PredictDB Pipeline for GTEx v7 data☆17Updated 3 years ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Updated last year
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆30Updated 6 years ago